Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2106 ATGGCTTTAGGTGTTCCTGCTCTTCCGTTGACATACGTGGCTCACGTTCTGGCAGTTGTTGCCAGCGTCTTGGTCGTGGTCTGGGTCGTCAATTTCAGGGGTGGCTTGGCTTGGGATTCTGATAACAAGTCCCTCATCTTCAACATTCATCCAGTTCTTATTGTTATTGGCTTACTAGTTCATGGGGGTGAAGCTATTATAAGTTACAAAGCTTTTCCCCTAAAGAAGGAAGTGAAGAAATTGATACACCTTGTTTTCCATGCCATCGCATTAATACTTGGAATAGTTGGAATTTATACTGCCTTCAAGTTTCACAATGAAAGTGGGATTGCCAATCTCTACAGCTTGCATTCATGGCTTGGAATTGGGGTTATTGTCCTTTATGGCATTCAGTGGATATATGGGTTTGTGATCTTTTTCTTCCCTGGTGGGACTCCAGACATTAGACGCGCCTCACTTCCTTGGCACGCGCTATTTGGGCTGTTTGTATTTGTCTTGGCTGTGGGCACTGCTGCTCTTGGGTTTCTGGAGAAGCTCACTTTCCTTGAGAACTCAGGATTGGACAAATATGGTTCTGAGGCTTTGCTTGTCAACTTCACTGCCATTATCACAATCTTATTTGGTGCCTTTGTTGTGTTATCTGCTCTAGCTGATGCTCCCCCAGCCCCTGCAGCAGATGACTATGAAGCCATATAG 696 0.4497 MALGVPALPLTYVAHVLAVVASVLVVVWVVNFRGGLAWDSDNKSLIFNIHPVLIVIGLLVHGGEAIISYKAFPLKKEVKKLIHLVFHAIALILGIVGIYTAFKFHNESGIANLYSLHSWLGIGVIVLYGIQWIYGFVIFFFPGGTPDIRRASLPWHALFGLFVFVLAVGTAALGFLEKLTFLENSGLDKYGSEALLVNFTAIITILFGAFVVLSALADAPPAPAADDYEAI* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2106 231 ProSiteProfiles Cytochrome b561 domain profile. 13 216 IPR006593 -
Gso10g2106 231 CDD Cyt_b561_ACYB-1_like 40 183 - -
Gso10g2106 231 Pfam Eukaryotic cytochrome b561 49 181 IPR006593 -
Gso10g2106 231 Gene3D - 3 220 - -
Gso10g2106 231 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 1 1 227 - -
Gso10g2106 231 PANTHER CYTOCHROME B561-RELATED 1 227 IPR043205 GO:0016491
Gso10g2106 231 SMART 561_7 49 175 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2106 Gso-Chr10 48079648 48082996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2106 1 218 Chloroplast and Mitochondria Gene Families AT4G25570 68.807 6.42e-110 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2106 K08360 - gmx:100527259 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2106 10 48079648 48082996 Gso10g2106 10 48079648 48082996 ECH
Gso20g1271 20 42754883 42757993 Gso10g2106 10 48079648 48082996 GST