Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2097 ATGGAGTTTTTTCTAGGGCTATGTGGGGTTCTTGTTGCCTTCTCAGCAGCACTTTGCCTCTTGTTGCTCTTGATATTAACATTTTATTGGGTTGTTTTCCCTAATCAAACACTTAAGAAGCTTAAGAAATGTGGGTTGGGAGGTCCAACCCCAAGTTTTCCACTTGGAAACATTGAAGAAATGAAACGAAAGAATAACATTCAATCTTCAATTGTATCCTCAAATTTCTCGCACGATATACACTCGAGCGTTTTCCCCTACTTTTCAAGCTGGCAGAAATCACATGGTAAGGTTTTCGTGTACTGGTTGGGGACGGAGCCATTTCTGTACGTTGCTGAGCCAGAGTTCTTGAAGAAAATGTCCACAGTGGTAATGGCTAAGAAATGGGGAAAACCAAGTGTGTTTAGAACTGACAGAGACCCCATGTTTGGGAGTGGTTTGGTTATGGTTGAGGGTAACGATTGGGTTCGTCACAGGCACATTGTTGCCCCAGCGTTCAATCCAATTAACTTGAAGGCCATGGCAAATATGATGGTTGAATCCACGAATCAAATGATAGATAGATGGGCTAACCAAATAAACACCGGCAACCCCGAATTCGATGTGGAGAGGGAGATCACAGCAACAGCTGGAGAGATCATAGCAAGAACAAGTTTTGGCATGAAAGACGGCAATGCAAGAGATGCCATTGCTAAATTAAGAGCCTTGCAAATGACTCTCTTCAAGACTAATCGTTATGTAGGTGTTCCCTTTGGCAAGTATTTCAATGTGAAGAAAACCTTGGAGGCCAAGAAACTCGGGAAAGAAATCGATGAGCTCTTGTTATCCATCATAGAATCCCGGAAGAATTCACCCACAAAGAATTCTCAACAAGATTTGTTAGGTTTGTTGCTTCAGGGAAACCATCAGGTTGATGGCCGGTCAGGAAAGACACTATCATCACGAGAAGTGGTTGATGAATGCAAGACATTCTTCTTCGGAGGCCATGAAACCACAGCACTTGCTATCACATGGACCTTGTTGCTTCTAGCCATGCATGAAGATTGGCAAAATCAGTTGAGAGATGAGATAAGACAAGTGGTGGGTGGATATGAAAAGCTTGATATCACCTCGCTCTCTGGTTTAAAGAAGATGAAGTGCGTAATGAATGAAGTTCTAAGACTATACCCACCAGCACCAAATGTTCAAAGGCAAGCAAGAGAAGACATTAAAGTTGATGATATAACAGTGCCTAATGGGACCAACTTGTGGATCGATGTGGTAGCAATGCACCATGACCCCGAAGTATGGGGAAACGACGCAAATGAGTTCAGACCAGAGAGGTTCATGGATGATGTGAATGGTGGGTGCAACCACAAGATGGGGTACTTGCCTTTTGGGTTTGGAGGGAGAATGTGTGTAGGAAGGAATTTGACCTTCATGGAGTACAAGATTGTCTTAACCCTACTTCTCTCTAGGTTTACTTTTAAGCTTTCACCAGGTTACAATCATTCACCTTCTATCATGCTCTCCCTAAGGCCAAGTCATGGACTTCCACTCATAGTTCAGCCCCTTTAG 1557 0.4322 MEFFLGLCGVLVAFSAALCLLLLLILTFYWVVFPNQTLKKLKKCGLGGPTPSFPLGNIEEMKRKNNIQSSIVSSNFSHDIHSSVFPYFSSWQKSHGKVFVYWLGTEPFLYVAEPEFLKKMSTVVMAKKWGKPSVFRTDRDPMFGSGLVMVEGNDWVRHRHIVAPAFNPINLKAMANMMVESTNQMIDRWANQINTGNPEFDVEREITATAGEIIARTSFGMKDGNARDAIAKLRALQMTLFKTNRYVGVPFGKYFNVKKTLEAKKLGKEIDELLLSIIESRKNSPTKNSQQDLLGLLLQGNHQVDGRSGKTLSSREVVDECKTFFFGGHETTALAITWTLLLLAMHEDWQNQLRDEIRQVVGGYEKLDITSLSGLKKMKCVMNEVLRLYPPAPNVQRQAREDIKVDDITVPNGTNLWIDVVAMHHDPEVWGNDANEFRPERFMDDVNGGCNHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTLLLSRFTFKLSPGYNHSPSIMLSLRPSHGLPLIVQPL* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2097 518 PRINTS E-class P450 group I signature 92 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g2097 518 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g2097 518 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g2097 518 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g2097 518 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g2097 518 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g2097 518 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g2097 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Gso10g2097 518 SUPERFAMILY Cytochrome P450 81 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g2097 518 PANTHER CYTOCHROME P450 FAMILY MEMBER 6 513 - -
Gso10g2097 518 Gene3D Cytochrome P450 29 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g2097 518 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g2097 518 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g2097 518 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g2097 518 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g2097 518 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 6 513 - -
Gso10g2097 518 Pfam Cytochrome P450 83 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2097 Gso-Chr10 47957126 47959409 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2097 13 518 Cytochrome P450 AT5G52400 58.789 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2097 - - gmx:100803409 1019.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1281 20 42866089 42868756 Gso10g2097 10 47957126 47959409 GST
Gso10g2097 10 47957126 47959409 Gso16g1505 16 35304253 35308049 PCT
Gso10g2097 10 47957126 47959409 Gso9g1132 9 32420185 32423962 PCT