Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2081 ATGCTTACATGGTGGGGGAAATCATCATCAAAAAAAACCAAGAAGAAAGCAAATAAGGAAAGTTTTTTTGACACACTGCACCGAAAACTCAGAATTTCATCTGAAGGTAAAGTAAACATTAGATCTGGAGGATCTCGTAGGCATTACAATGACACAATTTCAGAGAAGGGGGATCATTCTCCATCTGGATCAAGATCGCCTTCACCTTCCAAAGTGGCAAGGTGTCAAAGTTTTATTGATAGGCCTCATGCTCAGCCACTTCCACTTCCTGGTCTGCACCCTTCAAGTGTAGGCCGAGTAGATTCCGAAATTAGCATATCATCAAAATCAAGATTGGAAAAAGTCTCCAAGCCATCATTGTTTCTTCCACTTCCAACACCTGGATGCATACGTTGTAGGCCGAACCCTGCAGATTTGGATGGAGATATGGTCACTCCTTCAGTCTTTAGTGATTGCTCTGCTGACAGTGATGAGCCGGCAGACTCACACAATCGTAGTCCTCTAGCAACTGACTGTGAGACTGGGACTAGAACTGCTGCTGGCAGTCCTTCCAGCTCGATGCTCAAGGATCAACCACCTACTGTTTCCCTACTGAATTCAACAGGAGTAAAGAAACCAGGAAATATTCTAAGTAATCATATGTCTTCTACTTCACCAAAACATAGGCCTTTACGCAACCATGTTCCAAATCTTCAGGTTCCTCCTCATGGTGCCTTCTATAGTACTCCTGATAGTTCCTTGTCAAGTCCATCAAGAAGTCCATTGAGAGCATTTGGCACAGATCAGGTGTTGAATTCTGCTTTTTTGGCTGGAAAGCCATATCCAGAGGTCAATTTTGTTGGGTCTGGGCATTGCTCTAGTCCAGGTTCAGGTCACAATTCTGGGTATAATTCAATGGGAGGGGACATGTCAGGACCGTTACTTTGGCAACCAAGCAGGGGTAGCCCTGAGTATTCTCCAGTACCTAGTCCCAGAATGACTAGCCCTGGTCCAAGCTCTAGAATTCAGAGTGGAGCAGTCACACCTATTCATCCCAAAGCCGGGGGAACACCCACAGAATCACAGACTCATCGTTTGCCTCTTCCTCCTTTGTCAGTTTCTAATTCCTCACCGTTCTCTCATTCAAATTCTGCAGCAACATCTCCATCTATGCCAAGAAGTCCAGCTAGAGCAGATAATCCAAGCTCTGGCTCACGTTGGAAGAAAGGGAAGCTGCTTGGCAGCGGCTCATTTGGACATGTCTATCTTGGTTTCAATAGTGAAAGTGGCGAAATGTGTGCAGTGAAGGAGGTTACCCTGTTTTCAGATGATCCCAAGTCTATGGAAAGTGCTAAGCAATTTATGCAGGAAATTCATTTATTAAGCCGTTTACAGCATCCAAATATCGTCCAGTATTATGGTTCTGAAACAGTTGATGACAAGCTTTACATATACCTTGAATATGTATCTGGAGGCTCCATACATAAACTTCTTCAAGAATATGGGCAATTTGGTGAACTAGTTATTCGTAGTTATACTCAACAGATTTTGTCAGGGCTTGCTTATTTGCATGCTAAAAATACTCTCCATAGGGATATCAAAGGAGCAAATATACTGGTAGATCCAACTGGTCGGGTCAAGTTGGCAGACTTTGGCATGGCAAAACATATAACAGGGCAATCGTGTCTATTGTCATTCAAGGGAACCCCTTACTGGATGGCTCCTGAGGTTATAAAGAACTCTAATGGATGCAACCTTGCAGTGGATATATGGAGTCTTGGATGCACGGTTTTGGAAATGGCTACTACCAAACCTCCTTGGTTTCAGTATGAAGCGGTTGCTGCCATGTTCAAGATTGGTAATAGCAAGGAACTCCCAACAATCCCTGATCATCTCTCAAATGAAGGAAAAGATTTTGTTAGGAAATGTCTTCAGCGTAACCCGTATGATCGCCCTTCAGCCTGTGAATTGTTGGACCACCCTTTTGTAAAAAATGCTGCACCTTTGGAAAGACCTATTCTGGCTCCTGAAGTGTTGGACCCTGTTTCTGGGATCATACAGGGAGCAAAAGCTCTGGCCGCTGGACAAGGAAAGAATCTTTCTAGCTTGGATTCAGATAGACTTTCTATTCATTCTTCTAGATTTTTGAAAACTAATCCTCGTGAAAGTGAAATCCATATTCCAAGGAATATATCTTGCCCTGTTTCTCCCATTGGAAGCCCACTTTTGAGGTCAAGATCACCACAGCACAGGAATGGGAAAATGTCTCCTCCTATATCTAGCCCTCGGACTGCTTCTGGGGCGTCCACCCCTCTTGCTGGTGGCAGTGGTGCCATTCCATTTGGTAATCACTCTAAACAGCCAATTTACTTTCAAGAGGGTTTTGGAAGCATTCCCAAGTCCTCAAATGGTGTCTACATTAATGGCCATTCTCATCACGACTCGAGTGTTGACATTTTTCGAGGAATGCAAATAGGATCTCACATTCAACCAGAATTGGTTTCCAGTGAAAATGATGTTTTGGTTAATCAGTTTGCAAGGCATCCTCATGCAGAGCCATATGATTTTCAGTCAGTCTTGGCAGATCGTGTTGGCCGGCAGCTGCTGAGGGAACATGTTAAGATTAACCCATCCATTGATCTCAGTCCCAACTCGTCTTTGCTTAGCCGGCCAAACGGTTTATGA 2664 0.4396 MLTWWGKSSSKKTKKKANKESFFDTLHRKLRISSEGKVNIRSGGSRRHYNDTISEKGDHSPSGSRSPSPSKVARCQSFIDRPHAQPLPLPGLHPSSVGRVDSEISISSKSRLEKVSKPSLFLPLPTPGCIRCRPNPADLDGDMVTPSVFSDCSADSDEPADSHNRSPLATDCETGTRTAAGSPSSSMLKDQPPTVSLLNSTGVKKPGNILSNHMSSTSPKHRPLRNHVPNLQVPPHGAFYSTPDSSLSSPSRSPLRAFGTDQVLNSAFLAGKPYPEVNFVGSGHCSSPGSGHNSGYNSMGGDMSGPLLWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPKAGGTPTESQTHRLPLPPLSVSNSSPFSHSNSAATSPSMPRSPARADNPSSGSRWKKGKLLGSGSFGHVYLGFNSESGEMCAVKEVTLFSDDPKSMESAKQFMQEIHLLSRLQHPNIVQYYGSETVDDKLYIYLEYVSGGSIHKLLQEYGQFGELVIRSYTQQILSGLAYLHAKNTLHRDIKGANILVDPTGRVKLADFGMAKHITGQSCLLSFKGTPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWFQYEAVAAMFKIGNSKELPTIPDHLSNEGKDFVRKCLQRNPYDRPSACELLDHPFVKNAAPLERPILAPEVLDPVSGIIQGAKALAAGQGKNLSSLDSDRLSIHSSRFLKTNPRESEIHIPRNISCPVSPIGSPLLRSRSPQHRNGKMSPPISSPRTASGASTPLAGGSGAIPFGNHSKQPIYFQEGFGSIPKSSNGVYINGHSHHDSSVDIFRGMQIGSHIQPELVSSENDVLVNQFARHPHAEPYDFQSVLADRVGRQLLREHVKINPSIDLSPNSSLLSRPNGL* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2081 887 CDD STKc_MEKK1_plant 399 656 - -
Gso10g2081 887 MobiDBLite consensus disorder prediction 729 772 - -
Gso10g2081 887 MobiDBLite consensus disorder prediction 167 221 - -
Gso10g2081 887 MobiDBLite consensus disorder prediction 286 300 - -
Gso10g2081 887 MobiDBLite consensus disorder prediction 34 55 - -
Gso10g2081 887 Pfam Protein kinase domain 401 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2081 887 MobiDBLite consensus disorder prediction 286 401 - -
Gso10g2081 887 ProSitePatterns Protein kinases ATP-binding region signature. 406 429 IPR017441 GO:0005524
Gso10g2081 887 SMART serkin_6 400 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2081 887 ProSiteProfiles Protein kinase domain profile. 400 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2081 887 MobiDBLite consensus disorder prediction 348 394 - -
Gso10g2081 887 MobiDBLite consensus disorder prediction 56 73 - -
Gso10g2081 887 MobiDBLite consensus disorder prediction 1 21 - -
Gso10g2081 887 MobiDBLite consensus disorder prediction 34 73 - -
Gso10g2081 887 MobiDBLite consensus disorder prediction 150 221 - -
Gso10g2081 887 Gene3D Transferase(Phosphotransferase) domain 1 397 671 - -
Gso10g2081 887 SUPERFAMILY Protein kinase-like (PK-like) 383 674 IPR011009 -
Gso10g2081 887 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 800 - -
Gso10g2081 887 MobiDBLite consensus disorder prediction 735 764 - -
Gso10g2081 887 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2081 Gso-Chr10 47777580 47785511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2081 2 876 MAP Kinase Kinase Kinase AT1G63700 57.335 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gso10g2081 Pkinase 1.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2081 K20717 - gmx:100782929 1691.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2081 10 47777580 47785511 Gso10g2081 10 47777580 47785511 ECH
Gso20g1297 20 42999282 43007265 Gso10g2081 10 47777580 47785511 GST
Gso10g2081 10 47777580 47785511 Gso16g1490 16 35124786 35132517 PCT
Gso10g2081 10 47777580 47785511 Gso9g1108 9 31979501 31987316 PCT