Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2074 ATGTCGTCGCCGAGGTTCCCAGGTGGTGGAGCCTCTGATTTCTACGGCGGAGCAGGAGGATTTCCCAGTCAATCCACGGCGCTTCAACCCACCATGAACAACCACTCCGCCACCACACACCACCCTCTATACCGATCCCAACCTTCAATTTTTCTAAACCCCTCGTCCCACATCGCCCAACACCAAACACCCACTCTCATCGGTAAACGCACCCTCGCCGAATTCCAAACCCACAACCACAGCCTTAACCTTATTAACAACAACGATAACCTACTCCTTTCAAACCATCAACTTCGTTCTGTGAAGCCCAGAACTTTCCAGCACACAGAATTATCCACCTTTCCGTCACGTCGTTACGGCCTACCCCTTCTCCACCACCTTCGCCCTAACGCTGTTAACGCACAACAACAACCCGTTACGAATTCGATCCTCGCCAATACAAATTATTTGTCTCCGGTTCACAGCAGACTAACCGCAACCCACGAACCGGAGAAGAACCTAATAGCCCTCCGTCTCCAGGAGTTGGAAAAGCAGCTTCTAGAAGACAATGAAGACGACGCCGTTTCGGTCATTACCACCACCACTTCTGAATGGTCACACACAATACAAAACCTAATCACTCCGCAGAAACCCGCGTCTTCGTCTCCCACTTCCTCTACGACGTCGTCTAACACCTCCGTAGAATCCAGCAGTTACAAACAGTCCCTAACGGAGGCCGCAACCGCGATTTCAGAAGGCAAATTCGATGCCGCCACTGAGATCCTAACCCGATTGTCGCTGAATTCAGATCAACGCTTCGTGAATTGCATGGTTTCTGCGCTCAAATCTCGGATGAATCACGTTGAGTATCCACCTCCGGTTGCCGAATTGTTCGGCACAGAACACGCCGAGTCGACTCAGTTGCTGTTCGAGTACTCGCTCTTCTTCAAGGTCGCACGCATGGTCGCCAACATCGCAATACTCGAATCCGCATTAACCGAGAGCGGGAAGCTCTGCGTGGTGGATTTCGATATCTGCGACGAGAACCAATACGTGAGTCTTCTTCACGAGCTTTCGGCCCGGCGGAAGGGCGCTCCGGCTGCCGTGAAGATCGTCGTGGTGACGGAGAATTGCGCCGACGACGAGAGGCTGAATATTGTGGGCGTGTTGCTGGGGAGACACGCGGAGAAGCTTGGGATTGGCTTCGAATTCAAAGTGCTGACTCGGAGAATCGCCGAGTTGACTCGCGAGTCGCTGGGTTGCGACGCGGACGAGCCGCTGGCGGTGAACTTTGCGTACAAGCTTTATAGAATGCCTGACGAGAGCGTCTCCACGGAGAACCCTCGCGACAAGCTTCTGCGGCGTGTGAAGACACTCGCGCCGCGCGTGGTGACGCTGGTGGAGCAGGATGCCAACGCCAACACGGCGCCGTTCGTGGCTCGAGTAACCGAGTTGTGCGCGTATTACGGCGCGCTGTTCGACTCGCTCGAGTCGACGATGGCACGGGAGAACTTGAAGCGAGTCAGGATCGAGGAGGGACTGAGTCGGAAGGTGGTGAACTCGGTGGCGTGCGAAGGAAGGGACCGCGTGGAACGGTGCGAGGTGTTTGGGAAGTGGCGCGCGCGTATGAGCATGGCTGGGTTCAGGTTGAAGCCACTGAGTCAGCGAGTCGCTGATTCGATCAAAGCGCGACTCGGTGGCGCTGGGAACCGAGTCGCGGTAAAAGTAGAGAACGGTGGGATTTGCTTTGGCTGGATGGGAAGAACTCTCACCGTCGCATCTGCTTGGTGTTAA 1773 0.551 MSSPRFPGGGASDFYGGAGGFPSQSTALQPTMNNHSATTHHPLYRSQPSIFLNPSSHIAQHQTPTLIGKRTLAEFQTHNHSLNLINNNDNLLLSNHQLRSVKPRTFQHTELSTFPSRRYGLPLLHHLRPNAVNAQQQPVTNSILANTNYLSPVHSRLTATHEPEKNLIALRLQELEKQLLEDNEDDAVSVITTTTSEWSHTIQNLITPQKPASSSPTSSTTSSNTSVESSSYKQSLTEAATAISEGKFDAATEILTRLSLNSDQRFVNCMVSALKSRMNHVEYPPPVAELFGTEHAESTQLLFEYSLFFKVARMVANIAILESALTESGKLCVVDFDICDENQYVSLLHELSARRKGAPAAVKIVVVTENCADDERLNIVGVLLGRHAEKLGIGFEFKVLTRRIAELTRESLGCDADEPLAVNFAYKLYRMPDESVSTENPRDKLLRRVKTLAPRVVTLVEQDANANTAPFVARVTELCAYYGALFDSLESTMARENLKRVRIEEGLSRKVVNSVACEGRDRVERCEVFGKWRARMSMAGFRLKPLSQRVADSIKARLGGAGNRVAVKVENGGICFGWMGRTLTVASAWC* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2074 590 Pfam GRAS domain family 233 589 IPR005202 -
Gso10g2074 590 PANTHER SCARECROW-LIKE PROTEIN 8 61 590 IPR030013 -
Gso10g2074 590 MobiDBLite consensus disorder prediction 1 41 - -
Gso10g2074 590 ProSiteProfiles GRAS family profile. 223 590 IPR005202 -
Gso10g2074 590 MobiDBLite consensus disorder prediction 206 231 - -
Gso10g2074 590 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 61 590 IPR005202 -
Gso10g2074 590 MobiDBLite consensus disorder prediction 22 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2074 Gso-Chr10 47710312 47712441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2074 33 589 GRAS Transcription Factor Family AT5G52510 45.972 1.69e-144 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso10g2074 GRAS 8.8e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2074 - - gmx:100797571 1103.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2074 10 47710312 47712441 Gso10g2074 10 47710312 47712441 ECH
Gso20g1302 20 43045622 43047811 Gso10g2074 10 47710312 47712441 GST
Gso16g1480 16 34967992 34970388 Gso10g2074 10 47710312 47712441 PCT
Gso9g1098 9 31479514 31481954 Gso10g2074 10 47710312 47712441 PCT
Gso10g2074 10 47710312 47712441 Gso16g1480 16 34967992 34970388 PCT
Gso10g2074 10 47710312 47712441 Gso9g1098 9 31479514 31481954 PCT