Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2070 ATGAACACCCAAAACCTCATACCCCTAATAATCCTTCTTCTTTTCATACCTTTCTCAGTTTCATTCTCTCCCACAGATAACTTTCTTCTTAGTTGTGGATCATACAGCAATGCTTCCCTCTTCAACAGAGTCTTCATGGGAGATTCCACCAACCCAGGCTCCACTTTTCTATCTTCAGATGATTCCATTTCACTCACATACCAAAAGCCACCTCAGAATTTGTCTACTTTGTACCACACAGCCAGAGTTTTTAGAAGCACTGCGAGGTACAGGTTCAACATGAAGAAAAACGGCACTCACTTGGTGCGTTTTCATTTCTCCCCCTTCAAGGCTCAAAGTACTTTTGATCTTAAATCAGCAAAATTTAATGTCTTTGTTAACGGGGTTTCGGTGTTGAGCAATTTCCAACCACCTAATGATGTGCTGCTCAAAGAGTTTATTTTGAAGATTGAGTCAAACGTGCTTGAGATTTTGTTTAGGCCTGTTGGTGAATCAGGTTTTGCCTTTGTCAATGCTTTGGAGGTGTTTACTGCCCCTGTGGATTTTGTTATAGATGTTGGAGCCAGATTGGTTGGTCCTTCTGGGGTGGAGGAGTACAGAAACCTTTCATCTCAGGTTTTGGAAACTGTTCATAGGATCAATGTTGGGGGTTTGAAAATAACTCCCTTCAATGACACCCTTTGGAGGACTTGGATTCCTGATGAGGATTATTTGGTGTTTAAGGGTGCAGCAAAGCCTGCAGTGAGCACTCACACACCAAATTACCAGAAGGGAGGTGCAACTAGAGAGGTTGCACCTGAAAATGTTTACATGACAGCTCAGCAGATGAATAGGGAAAACTCAAGTTTGGCTTCAAGGTTCAACATAACCTGGAACTTCCCTGTGTCTCCTGGTGGTGGTGTTCCACACTTGGTTAGGTTGCATTTTTGTGATATTGTTAGTCCTGCTCTCAACTTGCTCTACTTTGATGTGTACATCAATGGGTACATTGCATACAAGGATCTTGATTTGTCAGCCCTTACAATCCACACACTTGCATCACCTGTCTATGTGGATTTTGTTACAAATTCAGTTGATTCAGGTTTTGTTCAAGTGAGTGTCGGTCCTTCTGAGCTGAGCAGTTCCATAAGGATGAATGCCATATTGAATGGTGCAGAGATAATGAAGATGGTCAATGATGTCGGTACTAATGTTGTGCATAGGAGGACGAATTTGTGGGTGTTGGTGGGTTCAACTGTTGGAGGAATTGGTGTCTTGTTTTTAGTTGTAACTGCTTTTCTACTTGGTACCAAATGCAGGAAGAATAAACCAAAACAAAGGACAATAGAAAGTGTTGGATGGACACCTTTGAGTATGTTTGGAGGGAGCTCCCTTAGTAGAAGCTCTGAGCCTGGTTCTCATGGACTTCTTGGCATGAAGATCCCTTTTGCTGAAATACAATCAGCAACAAACAACTTTGATAGAAGTCTGATTATAGGGTCTGGTGGATTTGGTATGGTCTACAAGGGAGTGCTGAGAGACAACGTGAAAGTTGCTGTCAAGAGAGGCATGCCAGGGTCCAGGCAAGGCCTTCCAGAGTTCCAGACTGAGATAACAGTTCTGTCCAAAATTCGCCATCGCCACCTAGTTTCACTAGTTGGTTTCTGTGAAGAGAATTCAGAAATGATACTTGTCTATGAGTATGTCGAAAAGGGTCCACTGAAGAAGCATTTATATGGTTCATCACTACAAACACCTCTCTCTTGGAAGCAGCGTCTTGAGATATGCATTGGTGCGGCTAGAGGCCTTCACTATCTTCACACTGGTTTTGCTCAAGGAATCATCCACCGTGACATCAAGTCAACCAACATATTACTTGATGAAAACTATGTTGCCAAGGTTGCTGACTTTGGTCTTTCAAGGTCAGGGCCATGCATCAATGAAACACATGTGAGTACTAATGTGAAAGGTAGCTTTGGCTATCTTGATCCCGAGTATTACCGGAGGCAGCAGCTTACGGATAAGTCAGATGTTTATTCATTTGGGGTTGTGCTTTTTGAGGTTCTTTGTGGAAGACCTGCTGTTGATCCACAACTTGCAAGAGAACAAGTGAATTTGGCAGAATGGGGACTTGAATGGCTGCAAAAGGGCATGGTGGAGCAAATTGTTGATCCTCATCTTGTTGGACAGATCCAACAAAACTCCTTGAAAAAATTTTGTGAGACTGCAGAGAAATGTTTGGCTGAATATGGTGTTGACAGGCCTGCAATGGGTGATGTGTTGTGGAATTTGGAATATGCACTTCAGCTCCAAGAAAGTGGTCAACAAAGGGAGCCACATGCCAATAGACATGCTAGTGAAGAATTTGTGAGTGTGACAAATGCAATTATTCCTGGAAATCCTTCTACCAACAGAAGGACAGAGAGGGATCATTATAACTGTTCTTCAGATGTAAGTACTAGCCAAGTGTTTTCCCAGCTAATGAACAATGAAGGCAGATAG 2481 0.4264 MNTQNLIPLIILLLFIPFSVSFSPTDNFLLSCGSYSNASLFNRVFMGDSTNPGSTFLSSDDSISLTYQKPPQNLSTLYHTARVFRSTARYRFNMKKNGTHLVRFHFSPFKAQSTFDLKSAKFNVFVNGVSVLSNFQPPNDVLLKEFILKIESNVLEILFRPVGESGFAFVNALEVFTAPVDFVIDVGARLVGPSGVEEYRNLSSQVLETVHRINVGGLKITPFNDTLWRTWIPDEDYLVFKGAAKPAVSTHTPNYQKGGATREVAPENVYMTAQQMNRENSSLASRFNITWNFPVSPGGGVPHLVRLHFCDIVSPALNLLYFDVYINGYIAYKDLDLSALTIHTLASPVYVDFVTNSVDSGFVQVSVGPSELSSSIRMNAILNGAEIMKMVNDVGTNVVHRRTNLWVLVGSTVGGIGVLFLVVTAFLLGTKCRKNKPKQRTIESVGWTPLSMFGGSSLSRSSEPGSHGLLGMKIPFAEIQSATNNFDRSLIIGSGGFGMVYKGVLRDNVKVAVKRGMPGSRQGLPEFQTEITVLSKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKKHLYGSSLQTPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCINETHVSTNVKGSFGYLDPEYYRRQQLTDKSDVYSFGVVLFEVLCGRPAVDPQLAREQVNLAEWGLEWLQKGMVEQIVDPHLVGQIQQNSLKKFCETAEKCLAEYGVDRPAMGDVLWNLEYALQLQESGQQREPHANRHASEEFVSVTNAIIPGNPSTNRRTERDHYNCSSDVSTSQVFSQLMNNEGR* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2070 826 SUPERFAMILY Protein kinase-like (PK-like) 473 755 IPR011009 -
Gso10g2070 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Gso10g2070 826 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 15 769 - -
Gso10g2070 826 Gene3D Phosphorylase Kinase; domain 1 459 561 - -
Gso10g2070 826 Gene3D - 206 392 - -
Gso10g2070 826 Gene3D - 27 181 - -
Gso10g2070 826 SMART serkin_6 486 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2070 826 Gene3D Transferase(Phosphotransferase) domain 1 562 784 - -
Gso10g2070 826 ProSitePatterns Protein kinases ATP-binding region signature. 492 514 IPR017441 GO:0005524
Gso10g2070 826 CDD STKc_IRAK 492 758 - -
Gso10g2070 826 Pfam Protein tyrosine and serine/threonine kinase 491 699 IPR001245 GO:0004672|GO:0006468
Gso10g2070 826 ProSiteProfiles Protein kinase domain profile. 486 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2070 826 MobiDBLite consensus disorder prediction 789 808 - -
Gso10g2070 826 PANTHER OS07G0166700 PROTEIN 15 769 IPR045272 GO:0004714|GO:0006468
Gso10g2070 826 Pfam Malectin-like domain 30 390 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2070 Gso-Chr10 47666810 47670067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2070 6 826 Receptor kinase-like Gene Family AT3G46290 48.870 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso10g2070 Malectin_like 9.2e-32 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2070 - - gmx:100797031 1633.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2070 10 47666810 47670067 Gso10g2070 10 47666810 47670067 ECH
Gso20g1304 20 43068801 43072008 Gso10g2070 10 47666810 47670067 GST
Gso16g1477 16 34940735 34943892 Gso10g2070 10 47666810 47670067 PCT
Gso9g1094 9 31403475 31406348 Gso10g2070 10 47666810 47670067 PCT
Gso10g2070 10 47666810 47670067 Gso16g1477 16 34940735 34943892 PCT
Gso10g2070 10 47666810 47670067 Gso9g1094 9 31403475 31406348 PCT