Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2062 ATGGTGTCAAAAAATCCGAACCCCTCTGAGGCTTTAAACTTGGACCCCTCCGGCATGTCGCTCCCCGGAATCCTCCCCTTCGCCGCCGCCGCCGCCGCCGCAGTTTCCTTTGAGGATCCTGCTAAGAAGACTCGCAAGCCTTACACTATCACCAAGTCTAGGGAGAGTTGGACCGAACCTGAGCACGACAAGTTCCTTGAAGCTCTTCAATTATTTGACCGTGACTGGAAAAAGATTGAAGCATTTGTTGGATCAAAGACAGTTATCCAGATACGTAGCCATGCTCAAAAATACTTTCTAAAAGTTCAGAAGAGTGGGACAAGTGAACATCTTCCTCCACCCAGACCAAAAAGAAAAGCTGTTCATCCATATCCTCAGAAAGCTTCAAAAAATGTTCCAGTACTGTCACAGGTATCAGGATCCTTTCAATCTTCATCAGCTTTGCTTGAACCTGGATACATATTAAAGCATGACTCTTCAGCAATGCCTAAAACTTCTATTATTGACACTACAGTGTCTTCCTGGTCAAACAACTATCTGCAGAAAACCACCAACGTATTGCATGGGCAAAAACAAAAAGTGAATAATTGTTGCAGTAGCAGTGAAAGTCCAAGAGCACAGTTGGTTGGTGAATCTAATGGTCGAGGGAATAATAGCCATCCATTGAGAGTTCTTCCGGATTTTGCTGAAGTATACAACTTCATTGGCAGTGTATTTGATCCAAATATAACTGGACATGTACAGAAACTAAAAAGGATGGACCCTATAGATGTTGAGACGGTGCTATTGTTGATGAGAAACCTGTCTATCAATTTAGCAAGCCCAGATTTTGAGGACCATAGAAGGCTGCTCGCATCATATGAGGTGGAACCTGAGGTCGATAAATACATCAATGCAGATCGAACCATGCTTGATGTGCGGTTAAAGAGTGCTACTTAG 939 0.4345 MVSKNPNPSEALNLDPSGMSLPGILPFAAAAAAAVSFEDPAKKTRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKSGTSEHLPPPRPKRKAVHPYPQKASKNVPVLSQVSGSFQSSSALLEPGYILKHDSSAMPKTSIIDTTVSSWSNNYLQKTTNVLHGQKQKVNNCCSSSESPRAQLVGESNGRGNNSHPLRVLPDFAEVYNFIGSVFDPNITGHVQKLKRMDPIDVETVLLLMRNLSINLASPDFEDHRRLLASYEVEPEVDKYINADRTMLDVRLKSAT* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2062 312 Gene3D - 57 104 - -
Gso10g2062 312 SUPERFAMILY Homeodomain-like 48 104 IPR009057 -
Gso10g2062 312 PANTHER SWI/SNF COMPLEX-RELATED 3 304 - -
Gso10g2062 312 ProSiteProfiles Myb-like domain profile. 49 99 IPR001005 -
Gso10g2062 312 SMART sant 53 101 IPR001005 -
Gso10g2062 312 Pfam Myb-like DNA-binding domain 54 99 IPR001005 -
Gso10g2062 312 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 52 101 IPR006447 GO:0003677
Gso10g2062 312 CDD SANT 56 99 IPR001005 -
Gso10g2062 312 MobiDBLite consensus disorder prediction 104 127 - -
Gso10g2062 312 ProSiteProfiles SANT domain profile. 52 103 IPR017884 -
Gso10g2062 312 PANTHER PROTEIN REVEILLE 6 3 304 - -
Gso10g2062 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 49 103 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2062 Gso-Chr10 47616184 47621804 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso10g2062 Myb_DNA-binding 3.9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2062 - - gmx:100794389 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2062 10 47616184 47621804 Gso10g2062 10 47616184 47621804 ECH