Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2057 ATGGCTGAGGACTGGGATCTCTTTGCCATCGTGAGAAGCTGCCAATCAGCCACCACAACAATTCCACAAACCACCACCAATAATACTTCCTCTTCCTTAGTTACTTCCACTATCAAGGAAGAAATATATGATGCATTTTCCTCTCCCAATATAGTGCCACCCAATACCAATGAGTTTCAAGAGCTACACCAATTGTTCACACCCTTTAACCCCACCAACAACACTAGTGCTCCGGGCATCAATCCCAATTCCCCTTATTTTGCAGAACAAGAAAGCCAGCAAATCAGTGAACACCTTCATATTTGGCCTCATTTTGTGCCAGAACAGTCTTCCACTCCCAGTTTCAATAGATTCCATGACCAACAACAACAGCAACAGATCAATCAACTACAGGCACTTCAGAAACACGAATTTCGACTACCCCAGAACATTTCTCCCACAGTTTCACCAAACGCACAACCTCAAACACCCAAATCAAGAAAAAGAAAAAGCCAACAGAAGAAGATGGTGTGCCATGTAACCGCAGATAACCTCTCAGCAGATTTGTGGGCATGGCGAAAATACGGACAAAAACCAATTAAGGGTTCTCCATATCCAAGGAATTACTATAGGTGCAGCAGTTCCAAAGGTTGTATGGCTCGAAAACAAGTCGAACGGAGTAACACTGAACCCGACATGTTCGTCGTTACGTACACCGGAGACCACTCGCATCCCCGGCCAACTCACCGGAACTCGCTCGCCGGAAGTACCCGGAGTAAGACTCTGGTAACCAATCCGCCACCGTCACCTGGGTCACTCTCCTGCTTCCAAGCCACCCCTTTTTCTTCTTCTTCTTCATCGCCACCACACTCTCCAACGTCGCCGGAGGAAGATCCACGGAAACCGCCGATTTAG 894 0.472 MAEDWDLFAIVRSCQSATTTIPQTTTNNTSSSLVTSTIKEEIYDAFSSPNIVPPNTNEFQELHQLFTPFNPTNNTSAPGINPNSPYFAEQESQQISEHLHIWPHFVPEQSSTPSFNRFHDQQQQQQINQLQALQKHEFRLPQNISPTVSPNAQPQTPKSRKRKSQQKKMVCHVTADNLSADLWAWRKYGQKPIKGSPYPRNYYRCSSSKGCMARKQVERSNTEPDMFVVTYTGDHSHPRPTHRNSLAGSTRSKTLVTNPPPSPGSLSCFQATPFSSSSSSPPHSPTSPEEDPRKPPI* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2057 297 Gene3D WRKY domain 162 233 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso10g2057 297 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 289 IPR044810 GO:0003700
Gso10g2057 297 ProSiteProfiles WRKY domain profile. 174 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso10g2057 297 MobiDBLite consensus disorder prediction 140 159 - -
Gso10g2057 297 SUPERFAMILY WRKY DNA-binding domain 174 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso10g2057 297 MobiDBLite consensus disorder prediction 140 170 - -
Gso10g2057 297 MobiDBLite consensus disorder prediction 231 297 - -
Gso10g2057 297 MobiDBLite consensus disorder prediction 242 284 - -
Gso10g2057 297 PANTHER WRKY TRANSCRIPTION FACTOR 27-RELATED 3 289 - -
Gso10g2057 297 SMART WRKY_cls 179 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso10g2057 297 Pfam WRKY DNA -binding domain 181 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2057 Gso-Chr10 47580193 47582123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2057 158 288 WRKY Transcription Factor Family AT5G52830 68.182 1.17e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso10g2057 WRKY 1.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2057 K13425 - gmx:100127366 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1887 1 55605298 55606447 Gso10g2057 10 47580193 47582123 ECH
Gso10g2057 10 47580193 47582123 Gso10g2057 10 47580193 47582123 ECH
Gso20g1312 20 43136402 43138536 Gso10g2057 10 47580193 47582123 GST
Gso16g1452 16 34768087 34769942 Gso10g2057 10 47580193 47582123 PCT
Gso9g1060 9 30694597 30696523 Gso10g2057 10 47580193 47582123 PCT
Gso10g2057 10 47580193 47582123 Gso16g1452 16 34768087 34769942 PCT
Gso10g2057 10 47580193 47582123 Gso9g1060 9 30694597 30696523 PCT