Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2045 ATGGCAAGTGCTGCTTCCATTTTTCCTTGTAATTGGGTGGTTCTTGCTCTGTGCCTGTGCTGTTTTAGTGGCTGCATTTCGGCCCAGATTGGTTTGGGCTCGCAGTTATTGGCTAGCAAGGCCCAAACATGGGTTTCTGAAAATGGTACATTTGCTTTGGGGTTCACTCCAGCAGAGACTGATAATCGATTGCTTGTGATTGGAATTTGGTTTGCACAGCTTCCAGGAGATCCAACTTTAGTTTGGTCACCCAATAGAGACACTCCAGTATCCCAAGAAGCAGCATTGGAGCTTGACACCACTGGCAACCTTGTTCTCATGGATGGAGACACCACAGTGTGGACCTCAAACACTTCAGGTGCTGATGTGCAAACAGCAACCATGTCAGAAACTGGCAACTTCATTCTCCACAGCACCAACAACCACTCTGTGTGGCAGAGTTTTTCTCAACCTTCTGACACTCTCCTCCCAAACCAGCTTCTAACAGTGTCTTCAGAACTAACATCATCAAAGTCTTCTTCTCATGGTGGCTACTATGCTCTCAAAATGCTTCAGCAGCCTACTTCTTTAAGCCTTGCTCTCACTTACAATCTCCCTGAGACTTACCAAGCCTCAGATGAATCATACACCAACTATTCCTATTGGCAAGGCCCTGATATCTCCAATGTGACCGGGGAAGTTATCGTGGTTTTAGACCAAGCCGGGAGCTTTGGAATTGTGTATGGAGACTCATCTGATGGAGCTGTTTATGTGTACAAGAATGATGGCGGTGATGATGCAGGCTTGTCTTCTGCAGTTCATCAATCTGCACCATTGACTGTTCTCAGGAGACTAACACTGGAAAAGAATGGAAATCTTCGGTTGTATCGATGGGACGAGGTGAACGGTTCGAGGCAGTGGGTGCCACAGTGGGCTGCAGTTTCAAATCCATGTGACATTGCTGGAGTTTGTGGCAATGGAGTTTGTAATTTGGATAGGAGTAAGACAAAGGCCACTTGCACTTGCCTGCCAGGAACTGCTAAAGTTGGAAGGGATGGACAGTGCTATGAGAATTCATCCCTTGTTGGAAAATGCAATGGCAAGCATGAAAACCTGACATCACAGCTTAGGATTTCAACAGTGCAGCAAACAAACTATTATTTTTCTGAATTTTCAGTAATAGCTAACTATAGTGATATTTCTAATGTGTCAAAATGTGGGGATGCTTGCTTGTTAGATTGTGATTGTGTGGCTTCTGTTTATGGACTAAATGAGGAGAGACCCTATTGTTGGGTGTTGAGGAGCTTAAGTTTTGGTGGTTTTGAGGATACAAGCTCAACTTTGTTTGTGAAGGTCAGAGCAAATGGGTCATGGACTTTAGAAGGCCAAGAAGGAGGGTCTAATAGCTCCTCTGATGGAATGGGAAGTGCAAAGGAGAAGGCTGTGATTATTCCTACTGTTCTGAGTATGGTAGTTCTCATTGTTTTGCTGAGTTTATTACTGTACTACACTGTTCATAGAAAAAGAACTTTGAAAAGGGAGATGGAAAGTTCCTTGATCTTATCTGGTGCTCCAATGAATTTCACATACCGCGATTTGCAAATTAGGACGTGCAACTTTTCACAGCTGCTAGGAACAGGTGGATTTGGGAGTGTGTATAAAGGAAGCCTGGGCGATGGTACCCTTGTGGCAGTGAAGAAACTTGACAGGGTTTTGCCTCATGGAGAGAAGGAATTTATCACTGAAGTAAACACTATTGGCTCAATGCATCATATGAATTTGGTTCGCCTATGTGGCTATTGTTCAGAGGGATCACACAGGCTTCTTGTTTATGAGTTCATGAAAAATGGATCCTTGGATAAATGGATCTTCCCTTCATATCAAGCGCGAGATAGATTGCTAGATTGGACAACTCGTTTCAATATAGCCATAGCTACTGCACAAGGGATTGCATACTTTCATGAGCAGTGCAGGGATCGGATAATACATTGTGACATAAAACCGGAAAATATATTGGTAGACGAAAACTTTTGTCCTAAAGTATCTGATTTTGGACTGGCCAAATTGATGGGAAGGGAGCACTCTCATGTGGTAACAATGGTCAGAGGCACAAGAGGTTATTTGGCACCAGAATGGGTTAGTAATCGCCCTATAACTGTAAAAGCTGATGTTTACAGCTATGGAATGCTTCTTTTAGAGATCATTGGTGGCAGGAGAAATCTTGATATGTCCTTTGGTGCTGAGGACTTTTTCTATCCTGGTTGGGCTTACAAGGAGATGACAAATGGGTCAATAATTAAGGTGGCAGATAAAAGATTAAATGGGGCAGTTGATGAAGAAGAGGTAACGAGAGCTCTGAAAGTTGCATTTTGGTGTATCCAAGATGAGGTTTCTATGCGACCAACAATGGGGGAAGTGGTAAGACTGCTGGAAGATTCAATCGACATTAATATGCCACCAATGCCACAAACAGTACTAGAGTTAATTGAGGAAGGCTTAGACCAAGTATACAAAGCTATGAAAAGAGAGTATAATCAATCTAGCTCATTCACTATTACCAGCCATCTTACATCTCATGCTACATGTAGCAATTCCACAATGTCACCAAGATAG 2592 0.4306 MASAASIFPCNWVVLALCLCCFSGCISAQIGLGSQLLASKAQTWVSENGTFALGFTPAETDNRLLVIGIWFAQLPGDPTLVWSPNRDTPVSQEAALELDTTGNLVLMDGDTTVWTSNTSGADVQTATMSETGNFILHSTNNHSVWQSFSQPSDTLLPNQLLTVSSELTSSKSSSHGGYYALKMLQQPTSLSLALTYNLPETYQASDESYTNYSYWQGPDISNVTGEVIVVLDQAGSFGIVYGDSSDGAVYVYKNDGGDDAGLSSAVHQSAPLTVLRRLTLEKNGNLRLYRWDEVNGSRQWVPQWAAVSNPCDIAGVCGNGVCNLDRSKTKATCTCLPGTAKVGRDGQCYENSSLVGKCNGKHENLTSQLRISTVQQTNYYFSEFSVIANYSDISNVSKCGDACLLDCDCVASVYGLNEERPYCWVLRSLSFGGFEDTSSTLFVKVRANGSWTLEGQEGGSNSSSDGMGSAKEKAVIIPTVLSMVVLIVLLSLLLYYTVHRKRTLKREMESSLILSGAPMNFTYRDLQIRTCNFSQLLGTGGFGSVYKGSLGDGTLVAVKKLDRVLPHGEKEFITEVNTIGSMHHMNLVRLCGYCSEGSHRLLVYEFMKNGSLDKWIFPSYQARDRLLDWTTRFNIAIATAQGIAYFHEQCRDRIIHCDIKPENILVDENFCPKVSDFGLAKLMGREHSHVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIIGGRRNLDMSFGAEDFFYPGWAYKEMTNGSIIKVADKRLNGAVDEEEVTRALKVAFWCIQDEVSMRPTMGEVVRLLEDSIDINMPPMPQTVLELIEEGLDQVYKAMKREYNQSSSFTITSHLTSHATCSNSTMSPR* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2045 863 Gene3D Transferase(Phosphotransferase) domain 1 607 818 - -
Gso10g2045 863 Pfam S-locus glycoprotein domain 270 338 IPR000858 GO:0048544
Gso10g2045 863 CDD STKc_IRAK 537 804 - -
Gso10g2045 863 PANTHER OS07G0415500 PROTEIN 14 863 - -
Gso10g2045 863 SMART serkin_6 531 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2045 863 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 165 IPR036426 -
Gso10g2045 863 Pfam Protein kinase domain 534 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2045 863 Gene3D - 32 150 IPR036426 -
Gso10g2045 863 Pfam D-mannose binding lectin 79 166 IPR001480 -
Gso10g2045 863 ProSiteProfiles Bulb-type lectin domain profile. 29 149 IPR001480 -
Gso10g2045 863 Gene3D Phosphorylase Kinase; domain 1 495 606 - -
Gso10g2045 863 SMART blect_4 35 151 IPR001480 -
Gso10g2045 863 SUPERFAMILY Protein kinase-like (PK-like) 509 803 IPR011009 -
Gso10g2045 863 ProSiteProfiles Protein kinase domain profile. 531 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g2045 863 ProSitePatterns Protein kinases ATP-binding region signature. 537 560 IPR017441 GO:0005524
Gso10g2045 863 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Gso10g2045 863 PIRSF SRK 2 858 IPR024171 GO:0004674
Gso10g2045 863 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 14 863 - -
Gso10g2045 863 CDD B_lectin 39 151 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2045 Gso-Chr10 47457256 47463467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2045 502 813 Receptor kinase-like Gene Family AT5G20050 45.399 1.61e-79 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso10g2045 Pkinase 3.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2045 - - gmx:100775424 1712.58