Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2033 ATGGCTTTCATTCCTGCTGCAACGGAGCTGTTGCCGACCGTTGTCAGTGATGCTGAACTCTCTAAAAAAGATGAGAAGCAGAAGATAGATATTCAACAGAATAGTAATCATATGACCAATCTTGCTATCACCAAGTGCAGTGGCGAGACACAAGCCAATTTGGCTTCAGTTATTACTCAATACGTGGAGACTCTAAATCAGCACAACTTGCGCTTCTTGGGTTACCCCACTAATCAAGACTTCGACTATGATGCACTAGCACCGTTATTGCATTTTCACCTAAACAATGTTGGTGATCCATTTACAGAGAGTAGCTTTAGTTTAAATTCATCAAAATTTGAAGTTTGCGTGCTTGATTGGTTTGCTAACCTATGGGAGATAGATAAGGGTGAGTATTGGGGATATGTCACAACTGGTGGAACTGAAGGAAATCTTCATGGAATTTTAACAGGGAGGGAACAGTTTCCAGATGGTATTCTATATACTTCACAGGATTCGCATTATTCAATATTTAAAGCAGCAAGAATGTATAGGATGCAATGTGTGACAGTTGGCACTTTGGTCTCTGGTGAGATTGATTGTGTTGATTTAAAGGCTTTACTTCTTGCTCATAAGGACAAGCCAGCCATCATCAATCTGAATATAGGAACAACCATGAAAGGAGCTATTGATGACATTGATCTTGTAGTGCAAACACTTGAAGGAAGTGGCTTTTCGTGTGATCAATTTTACATTCATTGTGATGGAGCTTTATTTGGAATGATGATGCCATTTCTTATACAAGCTCCAAAGGTTACCTTCAAGAAGCCTATTGGAAGTATAACCATTTCTGGCCATAAGTTCCTGGGATGCCCATTTCCTTGTGGTGTTTTAATAACTCGTTTGGAATATATCAACACATTAGCTAAAAATGTTGAATATATTGCTTCAAGGGATGTCACAATCACAGGAAGTCGTAGTGGGCATGCTCCAATTTTTCTCTGGTATGCACTCAAAGAAAGAGGTTCAGTAGGACTCCAAAATGAAGTACAAAAATGCATAATTAGTGCACGTTATTTACAACATCGACTTCGTGAAGCCAAAATTGGTGCAATGTTAAATGAGTTTAGCAACACTGTCGTCTTTGAGAGGCCTCAAGATGATGACTTCGCTCGTAAGTGGAGCTTAGCATGCAAAAAAAATATTGCACATGGGGTGGTGATGCAACATGTTACTGTTGAGATGTTGGACTCCTTCGTTAATGAATTTATTCAGGAACGACAAATTTGGTTTCAAGATGATGGTAAGAGAAATCCCCTATGCCTTGCAAACGACATTGGTGTTGGAAATTGTGCTTGCATATTGCACGAATGA 1353 0.3932 MAFIPAATELLPTVVSDAELSKKDEKQKIDIQQNSNHMTNLAITKCSGETQANLASVITQYVETLNQHNLRFLGYPTNQDFDYDALAPLLHFHLNNVGDPFTESSFSLNSSKFEVCVLDWFANLWEIDKGEYWGYVTTGGTEGNLHGILTGREQFPDGILYTSQDSHYSIFKAARMYRMQCVTVGTLVSGEIDCVDLKALLLAHKDKPAIINLNIGTTMKGAIDDIDLVVQTLEGSGFSCDQFYIHCDGALFGMMMPFLIQAPKVTFKKPIGSITISGHKFLGCPFPCGVLITRLEYINTLAKNVEYIASRDVTITGSRSGHAPIFLWYALKERGSVGLQNEVQKCIISARYLQHRLREAKIGAMLNEFSNTVVFERPQDDDFARKWSLACKKNIAHGVVMQHVTVEMLDSFVNEFIQERQIWFQDDGKRNPLCLANDIGVGNCACILHE* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2033 450 PANTHER - 16 449 - -
Gso10g2033 450 Pfam Pyridoxal-dependent decarboxylase conserved domain 110 369 IPR002129 GO:0016830|GO:0019752|GO:0030170
Gso10g2033 450 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 273 294 IPR021115 GO:0016831
Gso10g2033 450 SUPERFAMILY PLP-dependent transferases 65 418 IPR015424 -
Gso10g2033 450 Gene3D Aspartate Aminotransferase, domain 1 332 420 IPR015422 GO:0003824
Gso10g2033 450 PANTHER SERINE DECARBOXYLASE 16 449 - -
Gso10g2033 450 Gene3D - 90 331 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2033 Gso-Chr10 47347498 47358279 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2033 215 347 Calmodulin-binding Proteins AT1G65960 27.465 3.71e-06 47.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2033 10 47347498 47358279 Gso10g2033 10 47347498 47358279 ECH