Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2031 ATGGCAAAGAAAATGGAGGGGTTTTGGAGCATGTTTTGTGGGAAATCTGGTTGTGCAGAGACAGGAGGGAACCCTTGCAATTATGATTTTAAGTTTTTGAAAGATCCTTCCACATGTGTCAACCATTTGCTGTTTATTTGCATTAATGTGTTGCTGCTGATCATGATCTTATTTACAATCCTCAAGAAGTCATCACAGAAACCATCTCAAGGTCTAATCCAAGTGCAAAGTTATTCCAAATTGCAGCTAGTGTCTGCCATAGCCAATGGCTCTCTGGGGCTAATACATTTGTGCTCAGGCATTTGGCTTTTAGAGGAGAATCTGAGAAGAACACAAACAGCTTTGCCTCTTGATTGGTGGATGCTCGAAAGCATCCAGGGATTGACATGGTTGCTGGTGGGTTTTACAATAACTCTTCAGCTGAAACAATTTCCAAGAGCATGGTTATATATATTTTCTGTTGTAATCTTTATGGTTTCTGGTATTCTCTGTGCTTTGTCCTTGTTTTATGCAATTAGTACCAGAAAATTGTCCCTGAAAGTAGCTTTAGATGTTTTATCTTTTCCAGGGATAATTTTATTGGCACTATGCACTTACAAGGAATCTAAGTATAGAGACACTGAGAGAGAAAATAATGAAAGTCTATACACCCCTTTAAAAGAAGAGTCCAATAAAGTTGATTATGTTAGTTATGTCACACTATATGCAAAAGCTGGACTTTTCAGTAGGATGTCATTTTGGTGGATGAATCCATTAATGAAAAGGGGTGAAGAGAAAACACTTCAGGATGAGGACATACCAAAGTTGGGGGAGGCAGATCAAGCAGAAAGTTGTTATTTTCTGTTTCTAGACCAATTGAACAGACAGAAACAGAAAGAACCATCATCACAACCATCAATTTTGAAGACAATAATTATGTGCCACTGGAAGGAGATTTTGATATCAGGATTCTTTGCATTGCTAAAGGTAGTCACTCTCTCATCTGGCCCTTTGCTTCTGAATTCCTTTATATTGGTTGCTGAGGGTCATGAGAGTTTCAAATATGAAGGTTATGTGTTGGCCATATCACTGGTCTTTACAAAGATCATAGAATCCTTGTCACAAAGGCAGTGGTACTTTCGCACCAGACTCATTGGTATTAAAGTTAGATCACTGCTCATTGCAGCAATTTATAAAAAGCAACTGAGGTTGTCCAATGCTGCAAGATTGGTGCACTCTGGTGGTGAGATAATGAACTATGTGAATGTGGATGCTAATAGAATTGGAGAGTTTCCCTACTGGTTTCACCAGACATGGACAACAAGCGTCCAACTGTGTATTGCATTAGTAGTGCTTTTCCGTGCTGTTGGGCTAGCAACATTTGCCTCATTGGCGGTGATAGTTCTAACTGTGCTTTGCAATACTCCACTTGCTAAGTTGCAGCATAAGTTTCAGAGAAAACTTATGGTGTCACAAGATGAGAGATTGAAGGCCACTTCTGAGGCTCTTGTGAGCATGAAGGTTTTGAAGTTATATGCATGGGAAACCAATTTCAGAAATGCAATTGAAAGGTTGAGGGATGTGGAACTCAAAAGGTTGTCTGCGGTGCAATTAAGAAGGTCATATAGCAACTTTCTCTTTTGGGCCTCACCTGTTTTGGTCTCTGCTGCTTCCTTTGGGGCTTGCTACTTGCTTAATGTTCCTTTGCATGCAAATAATGTTTTCACTTTTGTGGCAACTTTACGCCTTGTTCAAGATCCTATTAGAACCATCCCTGATGTCATTGGAGTGGTCATTCAAGCAAAAGTTGCATTTGCAAGGATTGTTAAATTTCTTGACGCGCCTGAACTGCAGAGTGAAAATGCCAAGAAAAGGTGTTTTAGTGAAAATATGAGGGGCTCAATTTTGATAAATTCAACTGACTTTTCATGGGAAGGTAACATGTCAAAACCAACACTGAGAAACATAAACTTGGAGGTTGGACCAGGGCAAAAGGTGGCAATCTGTGGTGAAGTTGGCTCAGGAAAATCAACTCTCTTAGCAGCAATTCTCAGAGAAGTTCCTATTACTCGTGGAACTATTGAAGTTCATGGGAAGTTTGCCTATGTTTCTCAAACAGCATGGATACAGACAGGTACAATACGGGATAATATATTGTTTGGAGCAGCTATGGATGCTGAAAAATATCAAGAAACACTTCATAGGTCTTCACTAGTGAAGGACCTTGAGTTGTTTCCAGATGGTGATCTTACTGAAATAGGGGAGAGGGGGGTCAACCTGAGTGGCGGTCAGAAGCAGCGAATTCAACTTGCTCGCGCTCTTTATCAGAATGCTGATATATATCTCTTGGATGATCCATGCAGTGCTGTTGATGCACACACTGCCACAAATTTGTTTAATGATTACATCATGGAAGGACTTGCAGGGAAGACAGTCTTACTGGTGACTCATCAAGTTGATTTTCTTCCAGCCTTCGATTCTGTTTTGTTGATGTCTAATGGGGAAATCATACAAGCTGCTCCTTATCATCATCTGTTGAGCTCAAGCCAAGAATTTCAGGACCTTGTCAATGCTCACAAGGAAACTGCTGGTTCTAATAGGCTTGTGGATGTCTCTTCTTCCAAAGGAGACTCAAATACTGCCACAGAGATTAGTAAAATATACATGGACAAACAGTTTGAAACATCACAAGAAGGTCAATTAATTAAGAAGGAAGAGAAAGAGAAAGGAAACAAAGGGTTCAAACCTCACTTACAGTATCTGAATCAGGACAAAGGATATATATACTTCTATGTGGCTTCTCTTTCTCACCTTATATTTGTGATTGGCCAGATATTTCAGAACTTATGGATGGCTTCTAATGTTGACAATCCTTATGTCAGCACATTGCAATTGATTTTTGTGTACTTGTTGATAGGGTTTATTTCTGCATGTTTCTTGTTCATCAGAAGTCTTGTTGTAGTTTCTATGAGTATTCGATCATCAAAATCTTTATTTTTACAACTACTAAACTCCCTATTTCGTGCACCTATGTCATTTTATGACTCCACTCCTTTGGGAAGGATACTTAGTAGGGTCTCCTCAGATCTAAGCATTGTCGATCTTGATGTCCCATTTGGCCTTATTTTTGCTGTGGGAGCTACTACAACTTGTTATTCAAATCTTGCAGTTATAGCAGCCATCACTTGGCAAGTCTTGTTTATCTCTATACCAATGCTTTACATAGCATTTCGCTTGCAGAGATATTACTATGCCACTGCAAAAGAATTGATGCGGATGAATGGCACAACAAAATCCTTTGTAGCTAACCATCTTGCTGAATCTATTGCTGGAGTTGAGACAATAAGGGCTTTTGAGGAGGAGGATCGTTTTTTTGCAAAGAATCTTGATCTAATTGATGTCAATGCCAGTCCTTATTTTCATACCTATGCAGCAAATGAGTGGTTAATGCTAAGGTTAGAAACAATCAGTGCAGTGGTCTTTGCATCCGCTGCACTTTGCATGGTGGTACTTCCACCTGGGACTTTCACCTCTGGATTTATTGGCATGGCTCTCTCTTATGGCCTTTCATTAAACTCTTCCCTAGTATTTTCAATTCAAAACCAATGCACTCTAGCAAATCAAATAATATCAGTAGAGAGGCTAAATCAATACATGCATATACCAAGTGAGGCCCCAGAAGTAATAGAGGGAAATCGTCCTCCTGTGAATTGGCCAGCTGAGGGAAAAGTAGAATTACATGATTTGGAGATAAGGTACCGGCCTGATGCGCCACTAGTACTACGTGGGATCACATGCACATTTGAAGGAGGGCACAAGATTGGTGTTGTTGGCAGAACAGGCAGTGGAAAATCCACTCTTATAGGTGCCTTATTCCGTCTAGTGGAGCCAGCAGGTGGAAAAATAATAGTTGATGGCATAGACATTTGTTCTATTGGACTTCATGACTTGAGGTCACGCTTTGGTATCATACCTCAGGATCCTACTCTTTTCAATGGCACAGTCAGATACAATATGGACCCCTTATCTCAGCACTCAGATAAAGAGATATGGGAGGTTCTTAGGAAGTGTCAGTTGAGAGAAGTTGTTGAAGAGAAGGAAGAAGGGTTGGACTCCTCAGTTGTTGAAGCTGGGGCAAATTGGAGCATGGGACAACGACAATTGTTCTGCTTGGGGCGTTCCCTTTTGAGGAGAAGTCGGATACTAGTGCTTGATGAAGCAACTGCATCAATTGATAATGCAACAGATTTGATTCTACAGAAAACAATTAGGACAGAGTTTGCAGATTGTACTGTAATCACGGTTGCCCACAGAATACCAACTGTGATGGATTGCACTAAGGTTCTTGCCATTCGTGAAGGAGAATTGGTGGAGTATGATGAGCCAATGAACTTGATGAAGAGAGAAGGATCACTGTTTGGACAACTTGTCAAGGAATATTGGTCTCATTTGCAGTCTGCTGAATCACATTAA 4452 0.4032 MAKKMEGFWSMFCGKSGCAETGGNPCNYDFKFLKDPSTCVNHLLFICINVLLLIMILFTILKKSSQKPSQGLIQVQSYSKLQLVSAIANGSLGLIHLCSGIWLLEENLRRTQTALPLDWWMLESIQGLTWLLVGFTITLQLKQFPRAWLYIFSVVIFMVSGILCALSLFYAISTRKLSLKVALDVLSFPGIILLALCTYKESKYRDTERENNESLYTPLKEESNKVDYVSYVTLYAKAGLFSRMSFWWMNPLMKRGEEKTLQDEDIPKLGEADQAESCYFLFLDQLNRQKQKEPSSQPSILKTIIMCHWKEILISGFFALLKVVTLSSGPLLLNSFILVAEGHESFKYEGYVLAISLVFTKIIESLSQRQWYFRTRLIGIKVRSLLIAAIYKKQLRLSNAARLVHSGGEIMNYVNVDANRIGEFPYWFHQTWTTSVQLCIALVVLFRAVGLATFASLAVIVLTVLCNTPLAKLQHKFQRKLMVSQDERLKATSEALVSMKVLKLYAWETNFRNAIERLRDVELKRLSAVQLRRSYSNFLFWASPVLVSAASFGACYLLNVPLHANNVFTFVATLRLVQDPIRTIPDVIGVVIQAKVAFARIVKFLDAPELQSENAKKRCFSENMRGSILINSTDFSWEGNMSKPTLRNINLEVGPGQKVAICGEVGSGKSTLLAAILREVPITRGTIEVHGKFAYVSQTAWIQTGTIRDNILFGAAMDAEKYQETLHRSSLVKDLELFPDGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPCSAVDAHTATNLFNDYIMEGLAGKTVLLVTHQVDFLPAFDSVLLMSNGEIIQAAPYHHLLSSSQEFQDLVNAHKETAGSNRLVDVSSSKGDSNTATEISKIYMDKQFETSQEGQLIKKEEKEKGNKGFKPHLQYLNQDKGYIYFYVASLSHLIFVIGQIFQNLWMASNVDNPYVSTLQLIFVYLLIGFISACFLFIRSLVVVSMSIRSSKSLFLQLLNSLFRAPMSFYDSTPLGRILSRVSSDLSIVDLDVPFGLIFAVGATTTCYSNLAVIAAITWQVLFISIPMLYIAFRLQRYYYATAKELMRMNGTTKSFVANHLAESIAGVETIRAFEEEDRFFAKNLDLIDVNASPYFHTYAANEWLMLRLETISAVVFASAALCMVVLPPGTFTSGFIGMALSYGLSLNSSLVFSIQNQCTLANQIISVERLNQYMHIPSEAPEVIEGNRPPVNWPAEGKVELHDLEIRYRPDAPLVLRGITCTFEGGHKIGVVGRTGSGKSTLIGALFRLVEPAGGKIIVDGIDICSIGLHDLRSRFGIIPQDPTLFNGTVRYNMDPLSQHSDKEIWEVLRKCQLREVVEEKEEGLDSSVVEAGANWSMGQRQLFCLGRSLLRRSRILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTKVLAIREGELVEYDEPMNLMKREGSLFGQLVKEYWSHLQSAESH* 1484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2031 1483 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 931 1200 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso10g2031 1483 CDD ABC_6TM_ABCC_D2 919 1212 IPR044726 GO:0140359
Gso10g2031 1483 ProSitePatterns ABC transporters family signature. 753 767 IPR017871 GO:0005524
Gso10g2031 1483 Pfam ABC transporter transmembrane region 923 1162 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso10g2031 1483 Pfam ABC transporter transmembrane region 312 578 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso10g2031 1483 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 630 851 IPR003439 GO:0005524
Gso10g2031 1483 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 74 1483 - -
Gso10g2031 1483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1227 1464 IPR027417 -
Gso10g2031 1483 Gene3D ABC transporter type 1, transmembrane domain 284 610 IPR036640 GO:0005524|GO:0016021
Gso10g2031 1483 Gene3D ABC transporter type 1, transmembrane domain 885 1218 IPR036640 GO:0005524|GO:0016021
Gso10g2031 1483 SMART AAA_5 1263 1447 IPR003593 -
Gso10g2031 1483 SMART AAA_5 655 828 IPR003593 -
Gso10g2031 1483 CDD ABCC_MRP_domain1 628 828 - -
Gso10g2031 1483 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1239 1471 IPR003439 GO:0005524
Gso10g2031 1483 Gene3D - 1221 1472 IPR027417 -
Gso10g2031 1483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 621 851 IPR027417 -
Gso10g2031 1483 SUPERFAMILY ABC transporter transmembrane region 924 1217 IPR036640 GO:0005524|GO:0016021
Gso10g2031 1483 Pfam ABC transporter 1254 1402 IPR003439 GO:0005524
Gso10g2031 1483 Pfam ABC transporter 646 780 IPR003439 GO:0005524
Gso10g2031 1483 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 74 1483 - -
Gso10g2031 1483 CDD ABCC_MRP_domain2 1235 1455 - -
Gso10g2031 1483 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 313 593 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso10g2031 1483 SUPERFAMILY ABC transporter transmembrane region 301 608 IPR036640 GO:0005524|GO:0016021
Gso10g2031 1483 CDD ABC_6TM_ABCC_D1 314 601 IPR044746 GO:0140359
Gso10g2031 1483 Gene3D - 623 857 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2031 Gso-Chr10 47325283 47333176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2031 592 839 Calmodulin-binding Proteins AT2G36910 28.788 1.87e-25 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2031 K05666 - gmx:100784336 2902.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g2031 10 47325283 47333176 Gso10g2031 10 47325283 47333176 ECH
Gso20g1326 20 43298560 43306569 Gso10g2031 10 47325283 47333176 GST
Gso16g1414 16 34118935 34130904 Gso10g2031 10 47325283 47333176 PCT
Gso10g2031 10 47325283 47333176 Gso16g1414 16 34118935 34130904 PCT