Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso10g2028 | ATGCTTTGTCTCTTCCTCCTCCTCCTTCTTCTTCTCTTCACCTTCCCCTCCCTCGTTCTCACCCTCCCTTTCTTCCCCTCTGATAACCTCACCCTCTACGGTGACGCCTTCTTCACCCGCAACGCCATCACCCTCACCACCCAACACTCCAAATGCTCCTCTTCTTCCATCGGAAGAGCTTTCTTCATCTACCCCGTCCGTTTTCTTGACCCGCAAACAAACTCCACCGCCTCCTTCTCCTGCCGCTTCTCCTTCTCCATCCTCTCCTCCCCTTCTTGCCCCTCCGCCGACGGCCTCGCCTTCCTCATCGCCTCCTCCACCCACTTCCCCACCCTCTCCTCCGGTTACATGGGCCTCCCTTCCTCCTCCTTCTCCTCTTTCTTCGCCGTCGAATTCGACACCGCCTTCCACCCCTTCCTTGGTGACATCAACGATAACCACGTCGCCGTCGATGTCAACAGCCTCGCCTCCTCATTCGCCTCAGTCGACGCCGCGTCCCGAGGCGTCGACCTCAAGAGCGGGAAAATCATCACTGCATGGGTGGAGTATAGGCATGCAATGAGAATGGTACGTGTGTGGATCGGCTATTCCTCAACTAGACCCCCAACTCCGATTCTTGCTACCCAAATTGACCTTTCTGAGAGACTTGAGGACTTCATGCACGTTGGTTTCACTGCCTCCAACGGAGAAGGGTCGAGTGTTCACCTTGTTCATCATTGGCAGTTCAAGACTTTCGGCTATGATGATGATTCTCGCTCCATGGATGTCGTGGAGGAAGGTGACTGTTTCTTGTGTTATGAAGGGGATTCCAAGATGGCTCTTGGGTTGGCAGGGTTGACGGCGTTTGTGGTGTCGGGTTTGGCGGCAATGGTTGTGGTGTGTGTTTTCTTGACAAAGAATAAAGCTTGTATTAGGAAGAAGAATAAGGAAGAACAAGGGCAAAGTTGTAGGTTTCAGACGAGTAAAGTGCCAACAAGGTTGTCACTTTCTGACATTAAGTCTGCTACAATGGGGTTCAATCGAGATAGGCTTGTTGGGGAGGGTGCATCTGCAAAAGTGTATAAAGGGTATCTTCCTTTTGGAGGAGACGTGGCAGTGAAGAGATTTGAGAGAGATAACGGTTTGGATTGTTTGCACAACCCTTTTGCCACAGAGTTTGCCACCATGGTGGGTTACTTGCGGCACAAGAATTTGGTTCAGCTCAAGGGGTGGTGCTGTGAGGGGAATGAGTTGGTTCTGGTTTATGAGTTCCTCCCCAATGGGAGCCTCAATAAGGTTTTGCATAGAAACTTCAATTCTTCCATTGTTCTTTCGTGGCAGCAAAGGCTGAACATTGTTCTCGGGGTTGCTTCTGCTCTTACCTACCTTCATGAGGAGTGTGAGAGGCAGATCATTCATAGGGATGTGAAGACATGCAACATAATGCTTGATGCTGATTTCACTGCCAAGTTAGGGGATTTTGGGCTTGCGGAAGTGTATGAGCACAGTTCTAGCACGAGGGATGCTACTATACCAGCAGGGACAATGGGGTATCTTGCTCCTGAATATGTTTATTCTGGTGTTCCTACTGTGAAGACTGATGTGTACAGCTTTGGGGTGGTGGTGTTGGAAGTGGCAACTGGTAGAAAGCCTGTGGAGGATGATGGCACCGTGGTTGTGGATTTTGTGTGGGGTTTGTGGGGAAAGAGGAAGCTCATTGAAGCTGCTGATCCAAGATTGATGGGAAAATTTGATGAAAAAGAGATGGAAAGGATGTTATTGGTGGGGCTTCTTTGTGTGCACCCTGATTATGAGAAGAGGCCAAGAGTGAGAGAAGCAACAAGAATTCTTAAGAAGGAAGCACCACTTCCTTTGTTGCCAACCAGTAAACCAAGGGTGAGAATTAGGCCTATTTGTCCTGATGATGATACCTCTGAAGCACAGAGTGTTGTTGCGGATTGGCTCAGCACAGATGATGCTCCTTATTTGACCCCTAGAAGCCAGTTTTACTAG | 1992 | 0.4965 | MLCLFLLLLLLLFTFPSLVLTLPFFPSDNLTLYGDAFFTRNAITLTTQHSKCSSSSIGRAFFIYPVRFLDPQTNSTASFSCRFSFSILSSPSCPSADGLAFLIASSTHFPTLSSGYMGLPSSSFSSFFAVEFDTAFHPFLGDINDNHVAVDVNSLASSFASVDAASRGVDLKSGKIITAWVEYRHAMRMVRVWIGYSSTRPPTPILATQIDLSERLEDFMHVGFTASNGEGSSVHLVHHWQFKTFGYDDDSRSMDVVEEGDCFLCYEGDSKMALGLAGLTAFVVSGLAAMVVVCVFLTKNKACIRKKNKEEQGQSCRFQTSKVPTRLSLSDIKSATMGFNRDRLVGEGASAKVYKGYLPFGGDVAVKRFERDNGLDCLHNPFATEFATMVGYLRHKNLVQLKGWCCEGNELVLVYEFLPNGSLNKVLHRNFNSSIVLSWQQRLNIVLGVASALTYLHEECERQIIHRDVKTCNIMLDADFTAKLGDFGLAEVYEHSSSTRDATIPAGTMGYLAPEYVYSGVPTVKTDVYSFGVVVLEVATGRKPVEDDGTVVVDFVWGLWGKRKLIEAADPRLMGKFDEKEMERMLLVGLLCVHPDYEKRPRVREATRILKKEAPLPLLPTSKPRVRIRPICPDDDTSEAQSVVADWLSTDDAPYLTPRSQFY* | 664 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso10g2028 | 663 | Gene3D | - | 13 | 258 | - | - | |
Gso10g2028 | 663 | PANTHER | L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 | 24 | 628 | - | - | |
Gso10g2028 | 663 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 23 | 247 | IPR013320 | - | |
Gso10g2028 | 663 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 464 | 476 | IPR008271 | GO:0004672|GO:0006468 | |
Gso10g2028 | 663 | CDD | STKc_IRAK | 345 | 612 | - | - | |
Gso10g2028 | 663 | ProSiteProfiles | Protein kinase domain profile. | 339 | 619 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso10g2028 | 663 | PANTHER | - | 24 | 628 | - | - | |
Gso10g2028 | 663 | Gene3D | Phosphorylase Kinase; domain 1 | 298 | 417 | - | - | |
Gso10g2028 | 663 | Gene3D | Transferase(Phosphotransferase) domain 1 | 418 | 615 | - | - | |
Gso10g2028 | 663 | SUPERFAMILY | Protein kinase-like (PK-like) | 324 | 628 | IPR011009 | - | |
Gso10g2028 | 663 | Pfam | Protein kinase domain | 340 | 549 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso10g2028 | 663 | Pfam | Legume lectin domain | 25 | 248 | IPR001220 | GO:0030246 | |
Gso10g2028 | 663 | CDD | lectin_legume_LecRK_Arcelin_ConA | 27 | 246 | IPR001220 | GO:0030246 | |
Gso10g2028 | 663 | ProSitePatterns | Protein kinases ATP-binding region signature. | 345 | 367 | IPR017441 | GO:0005524 | |
Gso10g2028 | 663 | SMART | serkin_6 | 339 | 609 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso10g2028 | Gso-Chr10 | 47301314 | 47303371 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso10g2028 | 2 | 662 | Receptor kinase-like Gene Family | AT5G42120 | 53.890 | 0.0 | 725 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_L-LEC | Gso10g2028 | Pkinase | 1.8e-41 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso10g2028 | - | - | gmx:100783805 | 1271.53 |