Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2020 ATGGCATTAGATCACTCATCCCTCAACCAACCCAAATTTGTCCATCCAAACAATGACCTTGAGCAACAAGAAGCCCTAGAGGTTGAAACGAAGGACTTTGACTACTCAAAGCGATCTCAATGGCTACGTGCTGCTGTTTTAGGAGCCAATGATGGGTTGGTCTCAACAGCATCACTAATGATGGGTGTGGGAGCAGTGAAGCAAGACATCAAAGTTATGATCCTAACAGGGTTTGCAGGGCTAGTTGCTGGGGCATGCAGCATGGCCATAGGTGAGTTTGTGTCGGTGTATTCGCAATTGGACATAGAAGTTGCTCAAATGAAAAGAGAGAAAGAAAGGGACAGTATAGATCAAGATCAGGAAGATGATGATGGTGATGAGAAAGAGAAATTGCCAAACCCTATGCATGCTGCAGCAGCATCAGCTCTTGCATTTTCAGTTGGTGCAATGGTGCCTCTCCTTGCAGCCTCTTTCATAAGGGACTATAAGGTGAGGCTAGGTGTGGTTTTGGGAGCAGTGAGTTTAGCTCTTGTGGTGTTTGGTTGGTTGGGGGCAGTGTTGGGTAAGGCTCCAACATTTAGGTCTATTGTGAGAGTCTTGCTTGGGGGTTGGCTAGCCATGGCTATTACTTTTGGGCTAACCAAGTTAATTGGGTCAAGTGGTCTTTAG 669 0.4619 MALDHSSLNQPKFVHPNNDLEQQEALEVETKDFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKVMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKREKERDSIDQDQEDDDGDEKEKLPNPMHAAAASALAFSVGAMVPLLAASFIRDYKVRLGVVLGAVSLALVVFGWLGAVLGKAPTFRSIVRVLLGGWLAMAITFGLTKLIGSSGL* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2020 222 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 8 219 IPR008217 GO:0005384|GO:0030026
Gso10g2020 222 MobiDBLite consensus disorder prediction 109 131 - -
Gso10g2020 222 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 8 219 - -
Gso10g2020 222 CDD Nodulin-21 40 191 - -
Gso10g2020 222 Pfam VIT family 42 121 IPR008217 GO:0005384|GO:0030026
Gso10g2020 222 Pfam VIT family 126 214 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2020 Gso-Chr10 47186962 47187928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2020 17 222 Nodulin-like Gene Family AT3G43660 70.388 3.70e-102 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2020 K22736 - gmx:100815165 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1335 20 43448404 43449442 Gso10g2020 10 47186962 47187928 GST
Gso16g1351 16 33020204 33021268 Gso10g2020 10 47186962 47187928 PCT
Gso2g0677 2 7088798 7090044 Gso10g2020 10 47186962 47187928 PCT
Gso10g2020 10 47186962 47187928 Gso16g1351 16 33020204 33021268 PCT
Gso10g2020 10 47186962 47187928 Gso2g0677 2 7088798 7090044 PCT