Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2014 ATGCTCGGGGACTCAGCTGTGCTGGGAGCAGGAGGAGGAGGAGGTGGTGGCCGCGGAGGAGGAGTAGAAAGTGGTGCCTCCGCCGATGCAGTGGCGGCGACGGTGACCGTGACACATGATGTGGCGACGACAACCGGAGGAGGCGGTGGTGGATCAAATAATTCGGGGGACGATGAGAGGGGTAGAATCGAAGAAGGTGAACGTAGCTTCGGCGGTAACCGGTGGCCACGACAAGAGACTTTGGCCTTGTTAAGGATACGCTCCGATATGGACGTGGCGTTTCGAGATGCAAGTGTCAAGGGTCCCTTGTGGGAAGAAGTATCCAGGAAGATGGCAGAGCTTGGGTATCACAGAAGCTCCAAGAAGTGCAAAGAGAAATTCGAGAACGTGTACAAGTACCACAAGAGAACCAAAGAAGGCCGAAGTGGGAAACAAGATGGCAAAACCTATCGTTTCTTTGATCAACTACAAGCCCTTGAGAACCACTCTCCAACACCCCATTCTCCCAACCCTTCACCAAAACCCCCACAATCAGCACCATCAAGAGTAGTAGCATCATCGGTGTCACTACCAATTGCAACAACAACAACAGTGTCACTACCAATTCCAACACCAACAACAGTGCCAATGCAGCCTATATTGTCCAACAACGCTATACTCACTAGTAGTGTCCCCAATATCACTGTTCCATCAACAACACCACTCCCTATAACCATTCCTCAACCCATTCTCACCTCCCCATCAATAAACCTCACAATCCCTTCTTACCCTCCAACAAACCCTACCAATTTCCCACCACCACCAAACCCTACCCTACCATCCTCTTTCCCCACCGACACCTTCTCCAATTCCAGCTCCTCCTCCACCTCCTCCGAGGAAACATTGGAAGGGAGACGCAAGAGGAAGCGCAAGTGGAAAGATTTCTTCGAGAGACTAATGAAAGAAGTGATCGAGAAGCAAGAGGAGCTACAAAAGAAGTTCCTGGAAGCCATAGAGAAACGCGAGGACGACAGAATAGCAAGAGAAGAAGCATGGAGAGTACAAGAGATGAAAAGAATCAATAGGGAAAGAGAAATCTTAGCACAAGAAAGATCCATAGCCGCAGCCAAAGACGCAGCCGTTATGTCATTCCTTCAAAAAATAGCCGAACAACAAAACCTCGGTCAAGTATCGACCAACATCAACCTCGTACAACAACCACAACCTCAATTACAACCGCAGCCACCACTACAACAACAAGTGACACAACCTAGTATTGCAGCAGCACAACCTCCCGTACAACAGCCACCGCCCGTGGTTGTTACACAGCCCGTGGTGCTGCCAGTGGTGTCACAAGTGACGAATATGGAGATAGTGAAAGCCGATAATAATAGTAACAACAATAATAACGGCGAGAATTTCTTGGCACCAAGTTCTTCTCGGTGGCCAAAAGTGGAGGTTCAGGCATTGATAAAGCTTCGGACGAGCATGGATGAGAAGTATCAAGAGAATGGACCAAAGGGTCCTCTCTGGGAGGAGATCTCAGCCTCAATGAAGAAGCTCGGGTACAACCGAAACGCGAAAAGGTGCAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAAGTGAAGGAAAGCAACAAGCGGAGACCGGAAGATTCCAAGACGTGCCCTTATTTCCACCAGCTGGACGCGCTGTACAGGCAGAAGCACAGGGGCGAAGAGAGCCCCGCGGCGGTGGAGGCGAAGCCGGAGAGCGCGGTGGCGCCGTTGATGGTGCAGCCGGAGCAGCAATGGCCACCTCAGCAGCAGCAGCAGGATAGGGACATCACAATGGAAGACATGGAGAACGAAGATGATGAATATGAAGAAGAGAGGGAAGGAGAGGAAGAATTAGAGGATGATGAAGATGAAGAGGATGAAGAAGGTGGTGGTGGTGGTGGGAACTATGAGATAGTGGCAAACAAAACAAGTGGTGGTGGTGGTGCTTCTGCTGCTTCAGTGGGGGCTTCAACGGAGTAG 2004 0.503 MLGDSAVLGAGGGGGGGRGGGVESGASADAVAATVTVTHDVATTTGGGGGGSNNSGDDERGRIEEGERSFGGNRWPRQETLALLRIRSDMDVAFRDASVKGPLWEEVSRKMAELGYHRSSKKCKEKFENVYKYHKRTKEGRSGKQDGKTYRFFDQLQALENHSPTPHSPNPSPKPPQSAPSRVVASSVSLPIATTTTVSLPIPTPTTVPMQPILSNNAILTSSVPNITVPSTTPLPITIPQPILTSPSINLTIPSYPPTNPTNFPPPPNPTLPSSFPTDTFSNSSSSSTSSEETLEGRRKRKRKWKDFFERLMKEVIEKQEELQKKFLEAIEKREDDRIAREEAWRVQEMKRINREREILAQERSIAAAKDAAVMSFLQKIAEQQNLGQVSTNINLVQQPQPQLQPQPPLQQQVTQPSIAAAQPPVQQPPPVVVTQPVVLPVVSQVTNMEIVKADNNSNNNNNGENFLAPSSSRWPKVEVQALIKLRTSMDEKYQENGPKGPLWEEISASMKKLGYNRNAKRCKEKWENINKYFKKVKESNKRRPEDSKTCPYFHQLDALYRQKHRGEESPAAVEAKPESAVAPLMVQPEQQWPPQQQQQDRDITMEDMENEDDEYEEEREGEEELEDDEDEEDEEGGGGGGNYEIVANKTSGGGGASAASVGASTE* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2014 667 Coils Coil 306 333 - -
Gso10g2014 667 MobiDBLite consensus disorder prediction 275 292 - -
Gso10g2014 667 Gene3D - 75 136 - -
Gso10g2014 667 Gene3D - 475 536 - -
Gso10g2014 667 MobiDBLite consensus disorder prediction 584 667 - -
Gso10g2014 667 MobiDBLite consensus disorder prediction 1 74 - -
Gso10g2014 667 MobiDBLite consensus disorder prediction 160 186 - -
Gso10g2014 667 Pfam Myb/SANT-like DNA-binding domain 473 560 IPR044822 -
Gso10g2014 667 Pfam Myb/SANT-like DNA-binding domain 73 159 IPR044822 -
Gso10g2014 667 MobiDBLite consensus disorder prediction 258 274 - -
Gso10g2014 667 MobiDBLite consensus disorder prediction 37 52 - -
Gso10g2014 667 CDD GT1 73 138 - -
Gso10g2014 667 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 34 649 - -
Gso10g2014 667 SMART sant 71 133 IPR001005 -
Gso10g2014 667 SMART sant 471 533 IPR001005 -
Gso10g2014 667 MobiDBLite consensus disorder prediction 57 72 - -
Gso10g2014 667 PANTHER - 34 649 - -
Gso10g2014 667 ProSiteProfiles Myb-like domain profile. 473 531 IPR001005 -
Gso10g2014 667 Coils Coil 606 636 - -
Gso10g2014 667 MobiDBLite consensus disorder prediction 250 300 - -
Gso10g2014 667 MobiDBLite consensus disorder prediction 400 428 - -
Gso10g2014 667 CDD GT1 473 538 - -
Gso10g2014 667 MobiDBLite consensus disorder prediction 606 639 - -
Gso10g2014 667 MobiDBLite consensus disorder prediction 408 422 - -
Gso10g2014 667 ProSiteProfiles Myb-like domain profile. 73 131 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2014 Gso-Chr10 47123702 47127225 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2014 64 593 Trihelix Transcription Factor Family AT1G76880 50.464 2.71e-161 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso10g2014 Myb_DNA-bind_4 1.8e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2014 - - gmx:100811604 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1341 20 43513840 43517239 Gso10g2014 10 47123702 47127225 GST
Gso16g1344 16 32944201 32948003 Gso10g2014 10 47123702 47127225 PCT
Gso2g0674 2 7029067 7033855 Gso10g2014 10 47123702 47127225 PCT
Gso10g2014 10 47123702 47127225 Gso16g1344 16 32944201 32948003 PCT
Gso10g2014 10 47123702 47127225 Gso2g0674 2 7029067 7033855 PCT