Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g2003 ATGATGGCGTCTTCCAATTCACGAAAATCAGAAACTTCCCCTTCTCCCGCCCCGCAATTCACCACCACCAACTTCATCCCCATCCCCGCCGCCGCAGCCCCTAAAACCGTCGATGACGTGTGGCAGGAGATCGTGACCGGCGACCGCCGCGAGTGCAAGGAGGAGGCCCTCGACGACGACGACGACGACGACAACGAGATGATGACTCTCGAGGACTTCCTCGCCAAGGCCGACGCCGTGGACGACGCTGACCATGACCATGACCATGCCCATGACCACGACCCCGACTACCACAACGACGACGTCAAGATGCCAATGCCCCTCACCGAGAGGCTCGGCAGCGGCACCCTCTTCTCCTTCGACCACCTTCCCACGACGCCGTTTCACGACCCCTCCGAAGGCTCCGTCATAGGGTTCGGAAACGGCGTCGAGGTCATCGAATGCGGAAGGGGTAAAAGATCGCGTCCCGTTTTGGAGCAGTTGGATAAGGCCGCGCAACAGAGGCAGAGGAGGATGATCAAAAACAGAGAATCTGCTGCTAGGTCTAGGGAACGCAAACAGGCTTACCAAGTGGAATTGGAGTCTTTGGCGGTGAAACTAGAGGAGGAAAATGACAAGCTCTTGAAGGAAAAGGCTGAGAGGAAAAAGAAGAGGTACAAGCAGCTAATGGAAAAAGTACTCCCTATTGCGCAGAAGCAAAAGCCACCATGTATACTCCGTAGGGCTCGCTCCTTGCAATGGTAG 744 0.5632 MMASSNSRKSETSPSPAPQFTTTNFIPIPAAAAPKTVDDVWQEIVTGDRRECKEEALDDDDDDDNEMMTLEDFLAKADAVDDADHDHDHAHDHDPDYHNDDVKMPMPLTERLGSGTLFSFDHLPTTPFHDPSEGSVIGFGNGVEVIECGRGKRSRPVLEQLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERKKKRYKQLMEKVLPIAQKQKPPCILRRARSLQW* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g2003 247 Pfam bZIP transcription factor 165 224 IPR004827 GO:0003700|GO:0006355
Gso10g2003 247 SUPERFAMILY Leucine zipper domain 167 216 IPR046347 GO:0003700|GO:0006355
Gso10g2003 247 SMART brlzneu 163 225 IPR004827 GO:0003700|GO:0006355
Gso10g2003 247 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 31 246 IPR043452 GO:0003700|GO:0045893
Gso10g2003 247 MobiDBLite consensus disorder prediction 1 26 - -
Gso10g2003 247 CDD bZIP_plant_BZIP46 167 207 - -
Gso10g2003 247 Gene3D - 165 221 - -
Gso10g2003 247 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 165 217 IPR004827 GO:0003700|GO:0006355
Gso10g2003 247 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 170 185 IPR004827 GO:0003700|GO:0006355
Gso10g2003 247 Coils Coil 186 225 - -
Gso10g2003 247 PANTHER BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR 31 246 - -
Gso10g2003 247 MobiDBLite consensus disorder prediction 46 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g2003 Gso-Chr10 47009443 47012720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g2003 35 247 bZIP Transcription Factor Family AT5G44080 52.727 8.27e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso10g2003 bZIP_1 1.7e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g2003 K14432 - gmx:100808917 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1351 20 43646478 43649458 Gso10g2003 10 47009443 47012720 GST