Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1997 ATGAATTATTCTCTTGCCCTAGCCCTAGGCCTAATCCTCATTTCTTGTTCTCCTTTGCTAGCAAACGCTAGAGGCCACCATCATGCAGGTGGCCATCATCTAGGGTTGGTAGGGCAAATCTGCACGGAACTCATCCAAAACCAGACGACTTGCACGGACCTTGTAAAGGCAGCAGATCCTAAAATTGCACAGGCAAAGACATTCCAAGAGCTTGCACAGGCAGTGCTAGAATTTGCCGTGAACAAGGGAATAGAGGGCCAAACCTTCCTCAAGGGCTTGGCACTGATTGAGCAATCACCAGCCATTAAGGAATGTGCAAACTTTTTCTATGATGGGGTGGTTGGATCCTTCCGTAGTGCCTTACGTGAGTTGAAAGAAGATGCTCAGACCGCTAGCTATGATGCCAAAGCGGCTTATGATGGCCCTGACGGTTGCAATAGAGCCTTGGCCGCTGAAAATATCAATAACCCTGCTATTACTGCTCTTAACAGCGAAATAGCGTTGCTTAGCCAAATTGCATTCGAGGCCATATGCAAATATTCTAATTAA 549 0.4681 MNYSLALALGLILISCSPLLANARGHHHAGGHHLGLVGQICTELIQNQTTCTDLVKAADPKIAQAKTFQELAQAVLEFAVNKGIEGQTFLKGLALIEQSPAIKECANFFYDGVVGSFRSALRELKEDAQTASYDAKAAYDGPDGCNRALAAENINNPAITALNSEIALLSQIAFEAICKYSN* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1997 182 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 174 IPR035513 -
Gso10g1997 182 Pfam Plant invertase/pectin methylesterase inhibitor 36 173 IPR006501 GO:0004857
Gso10g1997 182 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 3 179 - -
Gso10g1997 182 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 179 IPR035513 -
Gso10g1997 182 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 3 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1997 Gso-Chr10 46949107 46949848 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1997 - - gmx:100305627 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g1997 10 46949107 46949848 Gso16g1318 16 32579668 32580558 PCT
Gso10g1997 10 46949107 46949848 Gso2g0658 2 6796841 6797647 PCT