Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1996 ATGAATTCTTCAGCATTATGTTCTCTGATGCTCACCCTTTGCTTGATCCTAATTTCTCATTCTCTTTTGCTAGCAAATGCTAAAGCCAATGGTCATCGTGGCCTACTTGGAAATAGTCAGAAGCCGATGATTGACCAAATTTGCAACCAAACCTCAGAGAATGAAAACGAGTGCCTTAACATTTTGAAAGCAGATCCAAAAATCGTGCAAGCAAAAGACTATTTTGAAATTTCAAAGGCGATCCTAGAGTTGGCCATAACGAAGTCAAAAAAGGGGCAGGAATTCCTCAAAGGGTTGGCACAAAAAACTGGTTCTCCAGCCATTGCTTTGTGTGCAAACCAATGGTATCCTTACACCGTTGGATCGTTAGGGAGTGCCCTAGCTGAGTTGAAAGAAAGTCCTGATACTGCCAGTTATGATGCCAAAGTTGCTGGTGATGGACCTGTATACTGTGAGGAAGCCATTGCTAAAGCACATATTGTTAACCGTGACATTTCTGCTATTAACCACCAAACTTCGTTGCTTAGCTTTGTTGCATTCCTAGCCACAAATTATCTTCCAGAAGATTAA 570 0.414 MNSSALCSLMLTLCLILISHSLLLANAKANGHRGLLGNSQKPMIDQICNQTSENENECLNILKADPKIVQAKDYFEISKAILELAITKSKKGQEFLKGLAQKTGSPAIALCANQWYPYTVGSLGSALAELKESPDTASYDAKVAGDGPVYCEEAIAKAHIVNRDISAINHQTSLLSFVAFLATNYLPED* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1996 189 Pfam Plant invertase/pectin methylesterase inhibitor 44 162 IPR006501 GO:0004857
Gso10g1996 189 CDD PMEI-Pla_a_1_like 48 184 IPR034088 -
Gso10g1996 189 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 184 IPR035513 -
Gso10g1996 189 SMART PMEI_2 39 182 IPR006501 GO:0004857
Gso10g1996 189 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 1 186 - -
Gso10g1996 189 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 185 IPR006501 GO:0004857
Gso10g1996 189 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 186 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1996 Gso-Chr10 46945136 46945790 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1996 - - gmx:102664122 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1357 20 43713233 43713956 Gso10g1996 10 46945136 46945790 GST
Gso16g1318 16 32579668 32580558 Gso10g1996 10 46945136 46945790 PCT
Gso2g0658 2 6796841 6797647 Gso10g1996 10 46945136 46945790 PCT