Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1992 ATGATGGCTGGTGTTAGTGGCAGTAGCACTACTCCCTTATTGTGCTCTTTGTTCTTTATTTCTTCCTTACTTTTTGCTTCCTGCACCCATGCCTCCTCCCAGGCACCTCCTCCAATTGTGGATGGACTTTCATGGGATTTCTATAGGACGAGCTGTCCCATGCTTGAAGGGATAGTGAGCAAGCATCTCCAGAAGGTGTTCAAGAAGGACAATGGTCAAGCTCCTGCCTTACTCAGGATCTTCTTCCATGACTGCTTTGTTCAGGGTTGCGATGGGTCGATATTGTTGGATGGAAGTCCAAATGAAAAGGATCAACCGGCAAACATAGGGATAAGGCCAGAGGCTTTGCAGACCATTGAAAATCTTCGATCTCTTGTTCACAAGCAGTGTGGAAGGGTCGTCTCTTGCGCTGACCTCGTTGTTCTAGCCGCACGCGATGCTGTTTCTCTGTCAGGGGGGCCAATATTTCCCGTGCCACTGGGAAGAAAAGATGGTCTAACTTTCAGCATAGACGGCACAGGAAACCTTCCGGGACCGTCTTCCCGAACCGGCCAGCTCCTCGACAGATTTGCCGGCAGAAACTTCGACGCCACCGACGTGGTCGCGCTCTCCGGCGCTCACACCTTCGGACGGGCCCACTGCGCCACATTCTTCAGCCGCATCAACCAGACGGACCCACCCATCGACCCTACCTTGAACAACAACCTCATCAAAACTTGTCCCTCTTCCCAGTCCCCCAACACGGCCGTGCTTGACGTGAGAACCCCCAACGTGTTCGACAACAAGTACTACGTTAACCTCGCCAACCGACAGGGTCTGTTTACCTCGGACCAGGACCTGTTCGGTGATGCCCGGACTAAGGGAATAGTTAACTCCTTTGCTGAAAACCAGAAACTGTTCTTTGAAAAGTTTTCAAATGCTGTTGTTAAGTTGAGTCAGTTGGATGTGTTGACCGGGAAACAAGGACAGATTCGCGCCAAATGCTCCGTCCCCAACAAGAAGAAGGTGGTCACCTCTGTGGTGGAAGAAGAGGGAGTGGATTTAAGCGCTCAGATGTGA 1059 0.5146 MMAGVSGSSTTPLLCSLFFISSLLFASCTHASSQAPPPIVDGLSWDFYRTSCPMLEGIVSKHLQKVFKKDNGQAPALLRIFFHDCFVQGCDGSILLDGSPNEKDQPANIGIRPEALQTIENLRSLVHKQCGRVVSCADLVVLAARDAVSLSGGPIFPVPLGRKDGLTFSIDGTGNLPGPSSRTGQLLDRFAGRNFDATDVVALSGAHTFGRAHCATFFSRINQTDPPIDPTLNNNLIKTCPSSQSPNTAVLDVRTPNVFDNKYYVNLANRQGLFTSDQDLFGDARTKGIVNSFAENQKLFFEKFSNAVVKLSQLDVLTGKQGQIRAKCSVPNKKKVVTSVVEEEGVDLSAQM* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1992 352 CDD secretory_peroxidase 42 330 IPR033905 GO:0004601|GO:0042744
Gso10g1992 352 PRINTS Plant peroxidase signature 52 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1992 352 PRINTS Plant peroxidase signature 76 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1992 352 PRINTS Plant peroxidase signature 133 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1992 352 PRINTS Plant peroxidase signature 152 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1992 352 PRINTS Plant peroxidase signature 198 210 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1992 352 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1992 352 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1992 352 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1992 352 ProSitePatterns Peroxidases active site signature. 74 85 IPR019794 GO:0004601
Gso10g1992 352 Pfam Peroxidase 60 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g1992 352 PANTHER PEROXIDASE 25-RELATED 20 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1992 352 ProSitePatterns Peroxidases proximal heme-ligand signature. 199 209 IPR019793 -
Gso10g1992 352 SUPERFAMILY Heme-dependent peroxidases 37 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso10g1992 352 ProSiteProfiles Plant heme peroxidase family profile. 42 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g1992 352 PRINTS Haem peroxidase superfamily signature 74 88 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g1992 352 PRINTS Haem peroxidase superfamily signature 134 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g1992 352 PRINTS Haem peroxidase superfamily signature 152 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g1992 352 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g1992 352 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g1992 352 PANTHER PEROXIDASE 20 336 - -
Gso10g1992 352 Gene3D - 46 329 - -
Gso10g1992 352 Gene3D Peroxidase, domain 2 178 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1992 Gso-Chr10 46918190 46920861 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1992 13 352 Peroxidase AT1G71695 51.862 3.68e-123 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1992 K00430 - gmx:100804126 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g1992 10 46918190 46920861 Gso10g1992 10 46918190 46920861 ECH