Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso10g1980 | ATGCCGGAATCGGAGATAGGGACGCCGACGGCGGCGTCGGTGCCGGCGACGCCGGATACTCCGGGAGGACCGTTATTCACGTCGCTGCGAGTTGACTCACTGTCACATGAACGTGAGTCGTTCTCAATGGCTGGGTGCAAGTGTCTGCCGACCAAGGGCCATAGCTGCTTCACTGATTTCTCAGTTGGTGTTCCACTTCCCAATGTTTCTCTCACTCAAAAGATGAACAAACAGGTTGGAGCAGAGTTTGTGGGGACTTTCATATTGATATTTGCAGCAACGGCAGGACCAATAGTGAACAACAAGTACAATGGAGTAGAGAGTCTAATGGGAAATGCAGCTTGTGCAGGGTTAACTGTGATGTTTATCATTCTGTCCATTGGCCACATCTCAGGTGCACACCTGAATCCATCCCTCACCATTGCCTTCGCGGCCTTTCGCCACTTCCCTTGGACCCATGTCCCGGCCTACATAGCAGCACAAGTCTCTGCCTCCATATGTGCATGTTATGCTCTCAAAGGTGTTTACCACCCTTTCCTCTCCGGTGGGGTCACTGTCCCCACCGTCAGCGTCGCCCAGGCTTTTGCAACCGAGTTTATCATCACTTTTATTCTCTTGTTTGTTGTCACTGCTGTCGCCACCGATACTCGTGCGGTTGGTGAATTGGCAGGTATTGCTGTTGGGGCTACAGTTTTACTCAACATTCTCATATCAGGGCCGACAAGTGGTGGTTCGATGAATCCGGTGCGCACGTTGGGTCCAGCCGTGGCAGCAGGAAATTACAAGCATATATGGATCTATTTGGTGGCACCAACGTTGGGTGCTCTCGCTGGTGCTGGTGTTTATACGCTCGTCAAGCTGCGTGACGAGGAGGCCGAACCGCCGCGACAAGTTAGAAGTTTCCGTCGCTAA | 912 | 0.523 | MPESEIGTPTAASVPATPDTPGGPLFTSLRVDSLSHERESFSMAGCKCLPTKGHSCFTDFSVGVPLPNVSLTQKMNKQVGAEFVGTFILIFAATAGPIVNNKYNGVESLMGNAACAGLTVMFIILSIGHISGAHLNPSLTIAFAAFRHFPWTHVPAYIAAQVSASICACYALKGVYHPFLSGGVTVPTVSVAQAFATEFIITFILLFVVTAVATDTRAVGELAGIAVGATVLLNILISGPTSGGSMNPVRTLGPAVAAGNYKHIWIYLVAPTLGALAGAGVYTLVKLRDEEAEPPRQVRSFRR* | 304 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso10g1980 | 303 | Pfam | Major intrinsic protein | 73 | 282 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Gso10g1980 | 303 | CDD | MIP | 77 | 285 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Gso10g1980 | 303 | SUPERFAMILY | Aquaporin-like | 74 | 295 | IPR023271 | - | |
Gso10g1980 | 303 | ProSitePatterns | MIP family signature. | 134 | 142 | IPR022357 | - | |
Gso10g1980 | 303 | Gene3D | Glycerol uptake facilitator protein. | 68 | 298 | IPR023271 | - | |
Gso10g1980 | 303 | PANTHER | AQUAPORIN NIP2-1 | 10 | 301 | IPR034294 | - | |
Gso10g1980 | 303 | PRINTS | Major intrinsic protein family signature | 77 | 96 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Gso10g1980 | 303 | PRINTS | Major intrinsic protein family signature | 116 | 140 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Gso10g1980 | 303 | PRINTS | Major intrinsic protein family signature | 153 | 172 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Gso10g1980 | 303 | PRINTS | Major intrinsic protein family signature | 197 | 215 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Gso10g1980 | 303 | PRINTS | Major intrinsic protein family signature | 228 | 250 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Gso10g1980 | 303 | PRINTS | Major intrinsic protein family signature | 265 | 285 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Gso10g1980 | 303 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Gso10g1980 | 303 | PANTHER | AQUAPORIN NIP5-1-RELATED | 10 | 301 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso10g1980 | Gso-Chr10 | 46792134 | 46798460 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso10g1980 | 25 | 303 | Major Intrinsic Protein MIP | AT4G10380 | 73.333 | 4.84e-147 | 413 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso10g1980 | K09874 | - | gmx:100775229 | 586.645 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso20g1371 | 20 | 43873066 | 43880037 | Gso10g1980 | 10 | 46792134 | 46798460 | GST |