Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1973 ATGTTCACCCCTCTCTCCTCTCTCCATACCAGCGCTCACTCCTCTCTCTCGGTCTCTCCTCAGAGGTTCCGAGAACTCCTCTCTCCAGTACCAGCGCTCACTCATCTCTCTGCGGGTACTCTCTTTTCTCAGAGGTTCCGAGAACTCCGATCTCGACCCACAGTCTCATTCCCTTGCGATTTCGACCCACACTCTCGCTGTGCCACGCTTCTCCCGAAAACCTCCGCACTTGTTCAGCTGCCGGCGGTGATTTCTGGTGACTGCATCGGAAAGGAAGAAGAAAAAGAAGTTTCTCCCTCTGCATTATTCCGAAAAAGGTGTCGGTCACAAGCAAGCAGGTGGTTGCAACGCAACGCATCCCATAAACCCTTCCTATTGGCTATGCATTCCCATATCGAGAGAATCCTATGGAGCGAGGACCAAATTTCTCGCCGTGTCTCCGAGCTCGCCGCCGAAATCTCCGCCGACTTCGGCGGACAATCTCCGGCTCCCGTGGTCGTCGGCGTGGCCACCGGGGCATTCCTCTTCTTGGCTGACCTCGTTCGCAAAATAGATCTGTCCATCGCCGTTGATTTCGTCCGAGTTGAATCCTACGGTTTCGGAACCGTTTCCAATGGCGCACCCACCATTTCCTTCGATTTGAAGGTCGACGTCAACGCCCGTCACGTCATCGTGGTTGAAGACATTGTAGATACTGGACATACCTTATCTAAAGTCATTGGGCACTTGAAATCAAAGGGAGTATCCTCTGTTTCTGTATGCACTTTCCTTGATAAACCTGCAAGGAGAAAAGTTCATTTTCAGTTGCTGGGTGAAGGGAAATACTACCGGGGATTTGAGTGTCCAGACTATTTCGTTGTAGGTTATGGACTGGATTTCGCTGAACTCTATAGAAATTTGCCTTACATTGGTGTTTTGAAGCCTGAACTTTACAAGTGA 939 0.5059 MFTPLSSLHTSAHSSLSVSPQRFRELLSPVPALTHLSAGTLFSQRFRELRSRPTVSFPCDFDPHSRCATLLPKTSALVQLPAVISGDCIGKEEEKEVSPSALFRKRCRSQASRWLQRNASHKPFLLAMHSHIERILWSEDQISRRVSELAAEISADFGGQSPAPVVVGVATGAFLFLADLVRKIDLSIAVDFVRVESYGFGTVSNGAPTISFDLKVDVNARHVIVVEDIVDTGHTLSKVIGHLKSKGVSSVSVCTFLDKPARRKVHFQLLGEGKYYRGFECPDYFVVGYGLDFAELYRNLPYIGVLKPELYK* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1973 312 Gene3D - 108 311 IPR029057 -
Gso10g1973 312 CDD PRTases_typeI 146 264 IPR000836 -
Gso10g1973 312 PANTHER HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE 127 312 - -
Gso10g1973 312 TIGRFAM HGPRTase: hypoxanthine phosphoribosyltransferase 135 307 IPR005904 GO:0004422|GO:0006166
Gso10g1973 312 SUPERFAMILY PRTase-like 107 312 IPR029057 -
Gso10g1973 312 Pfam Phosphoribosyl transferase domain 142 293 IPR000836 -
Gso10g1973 312 PANTHER HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE 127 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1973 Gso-Chr10 46717478 46729549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1973 126 311 PRT Gene Family AT1G71750 61.929 3.89e-86 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1973 K00760 - gmx:100797406 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1379 20 43962040 43963898 Gso10g1973 10 46717478 46729549 GST