Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1968 ATGGCGTATAGAACTTCTAGTATCACAAGTTCGTTAGTCACATTGGTGCTGTTAGGCACAATATTATGTGATGCAGAATTGTCTTCTACGTTTTACGACAGTGCTTGCCCCATTGCACTCAGCACCATAAGAACTGTGATTCGCAGTGCAGTATCTGCGGAGCGCCGCATGGCTGCGTCTCTCATTCGCCTTCATTTTCATGATTGCTTTGTTCAGGGTTGTGACGCATCAATTTTGCTTGATGATAGCTCCTCTATTGAGAGCGAAAAGAGTGCACTTCAGAATGCAAACTCAATAAGGGGATATAACATCATCGATCAAGCAAAATCTGAGGTGGAGAAACTATGCCCCGGAGTTGTGTCATGTGCTGACATTGTAGCAGTAGCAGCACGTGATGCATCATTTGCTGTGGGAGGTCCATCATGGACTGTGAAGCTTGGACGAAGAGATTCAACCACTGCAAGCAAAAGTTCGGCTACTAGTGACCTTCCACGATTCACAGACGATCTTGACACTCTTATCTCCAGATTCAATAATAAGGGTCTCACTGCCAGAGACATGGTTACTCTATCCGGTGCCCACACAATCGGACAAGCTCAATGCTTCACATTTCGTGGAAGAATATACAACAATGCAAGTGATATTGATGCAGGATTTGCTAGCACTCGCCAACGTGGTTGTCCATCCGTTAGTAATGATGATAATGACAAGAAATTGGCATCACTAGACTTGGTCACACCCAATTCTTTCGACAACAACTACTTCAAGAATTTGATTCAGAAGAAGGGTCTTCTTCAATCAGATCAAGTTCTGTTTAGTGGAGGATCTACAGATTCTATTGTGTCCGAATACAGCAATAAGCCTACAACCTTTAAGTCCGACTTCGCAGCTGCTATGATTAAAATGGGAGATATTCAACCATTAACTGCTTCAGCTGGAATCATAAGAAAGATTTGCAGCTCTATCAACTAA 972 0.4311 MAYRTSSITSSLVTLVLLGTILCDAELSSTFYDSACPIALSTIRTVIRSAVSAERRMAASLIRLHFHDCFVQGCDASILLDDSSSIESEKSALQNANSIRGYNIIDQAKSEVEKLCPGVVSCADIVAVAARDASFAVGGPSWTVKLGRRDSTTASKSSATSDLPRFTDDLDTLISRFNNKGLTARDMVTLSGAHTIGQAQCFTFRGRIYNNASDIDAGFASTRQRGCPSVSNDDNDKKLASLDLVTPNSFDNNYFKNLIQKKGLLQSDQVLFSGGSTDSIVSEYSNKPTTFKSDFAAAMIKMGDIQPLTASAGIIRKICSSIN* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1968 323 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Gso10g1968 323 Gene3D - 30 320 - -
Gso10g1968 323 Gene3D Peroxidase, domain 2 164 302 - -
Gso10g1968 323 CDD secretory_peroxidase 26 322 IPR033905 GO:0004601|GO:0042744
Gso10g1968 323 SUPERFAMILY Heme-dependent peroxidases 27 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso10g1968 323 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g1968 323 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g1968 323 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g1968 323 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g1968 323 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g1968 323 PANTHER PEROXIDASE 10 322 - -
Gso10g1968 323 ProSiteProfiles Plant heme peroxidase family profile. 26 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g1968 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Gso10g1968 323 PANTHER PEROXIDASE 72-RELATED 10 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1968 323 Pfam Peroxidase 44 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g1968 323 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1968 323 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1968 323 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1968 323 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1968 323 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1968 323 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1968 323 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1968 323 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1968 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1968 Gso-Chr10 46686416 46687754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1968 12 323 Peroxidase AT1G14550 66.561 1.26e-151 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1968 K00430 - gmx:100818538 597.43