Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1953 ATGGAGCCTCTCTCTTCCACCAAACACAACAACAATCTCTCCAAGCCTTCCTCCCTCCACACGGAGGCTCCGCCGCCGGAGGCCAGTCCCCTCCGGAAGATCATGGTGGTGGCCTCCATCGCCGCCGGGGTGCAATTCGGGTGGGCCCTACAGCTCTCTCTACTTACCCCTTACGTCCAACTGCTGGGGATTCCCCACACTTGGGCCGCCTTCATCTGGCTCTGCGGCCCAATCTCCGGCATGCTCGTCCAGCCCATCGTGGGATACCACAGCGACCGCTGCACCTCCCGCTTCGGCCGCCGCCGCCCCTTCATCGCCGCCGGCTCCCTCGCCGTCGCCATCGCCGTCTTCCTTATCGGCTACGCCGCCGACCTCGGCCACATGTTCGGCGACTCCCTAGCCAAAAAAACCCGCCCCCGCGCCATCGCCATCTTCGTTGTCGGCTTCTGGATCCTCGACGTCGCAAACAACATGCTACAAGGCCCCTGCCGCGCCCTCCTGGCCGACCTCTGCGCCGGAGACCACCGGAAAACGCGAAACGCCAACGCCTTCTTCTCCTTCTTCATGGCCGTCGGAAACGTCCTGGGCTACGCCGCGGGCTCTTACAGCGGCCTCCACAACGTCTTCCCTTTCACTAAAACAAAAGCATGTGATGTTTACTGCGCGAATTTGAAGAGTTGTTTCTTCCTCTCCATCGCGCTTCTTCTCACTCTCTCCACAATCGCCTTGACCTACGTGAAGGAGAAAACGGTGTCGTCAGAGAAAACGGTGAGGAGTTCGGTGGAGGAGGATGGGTCCCACGGGGGCATGCCGTGCTTCGGGCAGTTATTCGGTGCGTTCCGCGAACTGAAGCGTCCCATGTGGATCCTTCTGTTGGTGACGTGTCTGAACTGGATCGCCTGGTTCCCTTTTTTGCTATTCGACACCGACTGGATGGGGCGTGAGGTGTACGGAGGGACAGTAGGGGAAGGGAAGACGTACGATAGGGGTGTCCGTGCGGGTGCGTTGGGGCTGATGTTGAACTCTGTTGTGCTTGGTGCGACGTCGTTGGGAGTGGAAGTGCTGGCGCGTGGGGTTGGGGGCGTCAAGAGGCTGTGGGGGATTGTTAACTTCTTGCTCGCGGTTTGTTTGGCCATGACGGTTTTGGTTACTAAGATGGCCCAACATTCTCGACAATACACCCTACTCCCCAACGCCCACCAGGAACCCCTGCCTCCTCCCGCCGCCGTCAAAGCCGGCGCGTTGGCTCTCTTCTCTCTCCTCGGAATCCCACTCGCGATTACTTACAGCATACCCTTTGCTCTAGCATCAATATTCTCCAGCACCTCAGGGGCAGGCCAAGGTTTGTCTCTGGGAGTGCTCAATCTTGCAATTGTCATACCACAGATGGTGGTGTCTGTGATAAGTGGACCATGGGATGCTCTATTTGGAGGTGGTAACTTGCCAGCGTTCGTGGTGGGTGCGGTGGCGGCGGCCGCCAGTGGCATTTTATCCATAATCCTGCTGCCATCTCCACCACCGGATTTGGCCAAAGCAGCAACGGCAGCCGGAGGAGGATTCCACTAA 1566 0.5907 MEPLSSTKHNNNLSKPSSLHTEAPPPEASPLRKIMVVASIAAGVQFGWALQLSLLTPYVQLLGIPHTWAAFIWLCGPISGMLVQPIVGYHSDRCTSRFGRRRPFIAAGSLAVAIAVFLIGYAADLGHMFGDSLAKKTRPRAIAIFVVGFWILDVANNMLQGPCRALLADLCAGDHRKTRNANAFFSFFMAVGNVLGYAAGSYSGLHNVFPFTKTKACDVYCANLKSCFFLSIALLLTLSTIALTYVKEKTVSSEKTVRSSVEEDGSHGGMPCFGQLFGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGREVYGGTVGEGKTYDRGVRAGALGLMLNSVVLGATSLGVEVLARGVGGVKRLWGIVNFLLAVCLAMTVLVTKMAQHSRQYTLLPNAHQEPLPPPAAVKAGALALFSLLGIPLAITYSIPFALASIFSSTSGAGQGLSLGVLNLAIVIPQMVVSVISGPWDALFGGGNLPAFVVGAVAAAASGILSIILLPSPPPDLAKAATAAGGGFH* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1953 521 MobiDBLite consensus disorder prediction 1 19 - -
Gso10g1953 521 PANTHER SUGAR TRANSPORTER 21 512 - -
Gso10g1953 521 CDD MFS_SLC45_SUC 34 481 - -
Gso10g1953 521 MobiDBLite consensus disorder prediction 1 26 - -
Gso10g1953 521 SUPERFAMILY MFS general substrate transporter 34 506 IPR036259 -
Gso10g1953 521 Gene3D MFS general substrate transporter like domains 29 515 IPR036259 -
Gso10g1953 521 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 21 512 - -
Gso10g1953 521 Pfam MFS/sugar transport protein 42 300 - -
Gso10g1953 521 TIGRFAM GPH_sucrose: sucrose/H+ symporter 30 507 IPR005989 GO:0005887|GO:0008515|GO:0015770
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1953 Gso-Chr10 46494399 46497953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1953 8 521 Sucrose Transporter Gene Family AT1G22710 68.077 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1953 K15378 - gmx:547679 993.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1265 16 31973591 31975867 Gso10g1953 10 46494399 46497953 PCT
Gso10g1953 10 46494399 46497953 Gso16g1266 16 31980216 31983714 PCT