Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1934 ATGGGGGATTCCAATGTCACCAAGAATCACCTGTTTGCAACTTCTCCTCAACAAACTGAGGATGATGCTTGCCTATCTGCAATGCTGCTTTGCACTAATCTAGTGTACCCTGCAGTACTGAATGCTGCTATTGAGTTAAACTTGTTTGAGATCATAGCTAAGGCAACACCAGCTGGTACTTTTATATCATCCCATGAAATTGCTTCTAAGCTCCCAACACAACACCCTGACTTGCCTAATAGGCTTGACCGCATGCTGCGTTTGCTTGCTAGTTATTCTGTTCTTACTACTTCCACTCGCACCACACAACATGCAGCCTCTGAGACAGTTTATGGACTCTCACAAGTTGGACAATACTTTGTTCCAAATGGAAGTAGTGGCTATTTGGCTTCATTCACAGCATTTGTCTGTTATCCACCACTCTTACAAGTTTGGTTGAACTTCAAGGAAGCAGTGGTTGATGCAGACATTGACTTGTTCAAGAAACTTCATGGAGTAACAAAGTACCAGTACATGGAAAAGGATCCAAAAATGAACCAAATTTTTAACAAGTCAATGGCCGACGTGTGTGCAACAGAGATGACCAGAATACTTGAAATATACACTGGGTTTGAGGGAATATCAACATTGGTTGACGTAGGAGGTGGAAATGGACAAAATCTAAAAATGATATTGTCCAAATACCCTTTAATTAAAGGAATTAATTTTGATTTGCCCCAGGTGATTGAAAATGCACCACCCCTTCCAGGGATTGAGCATGTTGGAGGAGATATGTTTGTAAGAGTTCCACAGGGGGATGCCATAATACTAAAGGCTGTATGCCACAATTGGTTAGATGAAAAGTGCTTAGAATTTTTAAGCAATTGTCACAAAGCATTGTCTCCAAATGGGAAGGTGATTGTGGTGGAGTTCATATTGCCAGAAGAACCAGAACCAACTGAAGCATCTCGACTTGTTTCCACTCTTGACAACCTCATGTTTATCACTGTTGGTGGAAGGGAAAGAACTCAGAAACAATATGAGAATTTGTGCAAGCTCTCTGGATTTTCAAAATTTCAAGTTGCTTGTCGTGCCTTCTCTAGTCTGGGAGTGATGGAATTTTACAAATAG 1110 0.409 MGDSNVTKNHLFATSPQQTEDDACLSAMLLCTNLVYPAVLNAAIELNLFEIIAKATPAGTFISSHEIASKLPTQHPDLPNRLDRMLRLLASYSVLTTSTRTTQHAASETVYGLSQVGQYFVPNGSSGYLASFTAFVCYPPLLQVWLNFKEAVVDADIDLFKKLHGVTKYQYMEKDPKMNQIFNKSMADVCATEMTRILEIYTGFEGISTLVDVGGGNGQNLKMILSKYPLIKGINFDLPQVIENAPPLPGIEHVGGDMFVRVPQGDAIILKAVCHNWLDEKCLEFLSNCHKALSPNGKVIVVEFILPEEPEPTEASRLVSTLDNLMFITVGGRERTQKQYENLCKLSGFSKFQVACRAFSSLGVMEFYK* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1934 369 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 369 - -
Gso10g1934 369 Gene3D - 4 120 IPR036388 -
Gso10g1934 369 Pfam Dimerisation domain 39 90 IPR012967 GO:0046983
Gso10g1934 369 Pfam O-methyltransferase domain 145 350 IPR001077 GO:0008171
Gso10g1934 369 PIRSF O-mtase 5 369 IPR016461 GO:0008168
Gso10g1934 369 Gene3D Vaccinia Virus protein VP39 123 369 IPR029063 -
Gso10g1934 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 366 IPR029063 -
Gso10g1934 369 PANTHER O-METHYLTRANSFERASE 1 369 IPR016461 GO:0008168
Gso10g1934 369 CDD AdoMet_MTases 209 306 - -
Gso10g1934 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 369 IPR016461 GO:0008168
Gso10g1934 369 SUPERFAMILY "Winged helix" DNA-binding domain 20 124 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1934 Gso-Chr10 46300926 46302986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1934 14 359 Monolignol Biosynthesis Gene Families AT5G54160 48.415 3.09e-113 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1934 - - gmx:100787536 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1422 20 44405349 44412660 Gso10g1934 10 46300926 46302986 GST