Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1914 ATGGGGAGGAAAGGGGGTTGGTTTTCTGCAGTGAAGAGAGTTTTTGTTTCATATTCCAAAAAGGAACAGAAACAGCATCATCATAAGTCAAAGTTAGGATGTTTTGGGACTCATCACTATGAGGATCTAGAAGGAGCGCCAATTGCCGCTGTTCCTTCACTTCCACCAAGAAAAGACCCCAAACCAATAAGTGAGGCAGAGAATAATGAACAGAGCAAACAAGCCTTTTCTTTGGTTTTGGCCACTGCTGTGGCGGCAGGGGCTGCTGTTGCTGCTGCTGCTGCAGAGGTTACTCGTCTCACAAACACGCCTCGTTCTAATGGAAAAGCGAATCAAGAAATGGCAGCTATCAAGATTCAAACAGCATACCGTGGATATTCGGCAAGAAAATCCTTGCGTGGCTTGAGAGGTTTGTCGAGGTTGAAAACGTTGGTGCAAGGGCAATCTGTTCAACGACAAGCGGCTACTACCTTGCAATGCATGCAAACTCTTTCACGGTTGCAGTCTCAGGTTCGTGCAAGGAAGGTCAGAATGTCTGAGGAGAATCAATCTCTTCAAAGGCAACTGCAGCAGAAACGTGAAAAGGAATTTGACAAGTCGCAAGCTAATCAGATTGGAGAGAAGTGGGATGATAGCTTGAAATCAAAGGAGCAAGTTGAAGCCAAATTGTTGAACAGGCAAGTAGCTGCTATGAGAAGAGAAAAGGCTTTGGCCTATGCATCAACACATCAACAAACGTGGAGGAACTCTTCAAAATCTGCTACAAATGCCACATTTATGGATCCAAACAATCCCCATTGGGGTTGGAATTGGCTAGAGCGATGGATGGCTGCAAGGCCGTGGGAGGGTCAAAACACTACATACCACATTGGCCATGCATCTGCCAAAAGTGTTGCAAGCCAAACCATGTCAGTTGGTGAAATCACTAAATTGTATTCTCTCCGTGATCAGAATAATGATATCAAAACTTCACCAGCAAACCAAAAACCAACCCGTCCCTGCAGCCACAATTCCCCTTCAACAACACCCTCAAAGGTCCCATTAGCCAATGGAGCAAAAACAAAGGTACTATCAAGTTCAAGGGGTGGTTCATGGGGGGGTGATGGTGACTCAAAAAGCATGTTCAGCAAAAACTTAGAAAACACTCGCAGGCACAGCATTGGAGTGTCTCAAGTGAGAGATGATGAGAGCAATTCAAGCTCATCACCGTCTACAAAGGTCGCAACCAAGGTAAAGTCATCATCATCATCATCCAAAGTGAGAAGTGCATCGTTTGGTGTACATAGAAATGGAACACCTGAAAAAGCAACTTCTGCTCCCCTAAAGAAGAGGCTTTCTTCCCCTGCTTCTCCAGCCGGTATAAGAAGGTATGCTGTTTCAACTAGGCCGGGAAATGTGGCTTCCAACAAGAGTGTTGCTAATGCTATACCATCTCTGATGAGGAGAAAGTGA 1452 0.4532 MGRKGGWFSAVKRVFVSYSKKEQKQHHHKSKLGCFGTHHYEDLEGAPIAAVPSLPPRKDPKPISEAENNEQSKQAFSLVLATAVAAGAAVAAAAAEVTRLTNTPRSNGKANQEMAAIKIQTAYRGYSARKSLRGLRGLSRLKTLVQGQSVQRQAATTLQCMQTLSRLQSQVRARKVRMSEENQSLQRQLQQKREKEFDKSQANQIGEKWDDSLKSKEQVEAKLLNRQVAAMRREKALAYASTHQQTWRNSSKSATNATFMDPNNPHWGWNWLERWMAARPWEGQNTTYHIGHASAKSVASQTMSVGEITKLYSLRDQNNDIKTSPANQKPTRPCSHNSPSTTPSKVPLANGAKTKVLSSSRGGSWGGDGDSKSMFSKNLENTRRHSIGVSQVRDDESNSSSSPSTKVATKVKSSSSSSKVRSASFGVHRNGTPEKATSAPLKKRLSSPASPAGIRRYAVSTRPGNVASNKSVANAIPSLMRRK* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1914 483 MobiDBLite consensus disorder prediction 316 469 - -
Gso10g1914 483 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 483 - -
Gso10g1914 483 Coils Coil 214 234 - -
Gso10g1914 483 MobiDBLite consensus disorder prediction 316 366 - -
Gso10g1914 483 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Gso10g1914 483 Pfam IQ calmodulin-binding motif 114 133 IPR000048 GO:0005515
Gso10g1914 483 Gene3D - 99 132 - -
Gso10g1914 483 MobiDBLite consensus disorder prediction 374 425 - -
Gso10g1914 483 Coils Coil 168 195 - -
Gso10g1914 483 MobiDBLite consensus disorder prediction 49 70 - -
Gso10g1914 483 SMART iq_5 111 133 IPR000048 GO:0005515
Gso10g1914 483 MobiDBLite consensus disorder prediction 178 202 - -
Gso10g1914 483 PANTHER IQ-DOMAIN 5-RELATED 1 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1914 Gso-Chr10 46084931 46088515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1914 1 452 IQD Protein Family AT5G03040 41.830 8.04e-88 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1914 - - gmx:100807307 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1439 20 44616130 44620018 Gso10g1914 10 46084931 46088515 GST