Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1909 ATGCCGCCTGAACCATTGCCTTGGGATCGAAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCCGAGTCGCTTGGTTCTGTCGCCAGATGGAGGGATTCCTCGCACCACCGCGACTTCAACCGCTGGGGATCCGCCGAGTTTCGCAGACCGCCAGGTCATGGTAAGCAGGGTGGCTGGCACCTGTTTTCCGAGGAACCTGGTCATGGGTATGCGATTTCTCGGTCCAGCAGTGACAAGATGCTTGAAGATGATAGTCGGCCGTCGATCTCGCGCGGTGATGGAAAGTATGGCAGGAGCAGTAGGGAAAATAGAGGAGGACCCTTTGGTCAGAGAGATTGGCGAGGGCATTCGTGGGAACCCAACAATGGTTCTATGAATTTTCCCAGGAGGCTGCAGGATGTGAACAATGACCAGAGGTCAGTAGATGATGCCCTAGCATATTCCTCTCATCCACATTCTGATTTTGGGAACGCTTGGGATCAGCACCACTTGAAAGACCAGCACGATAAGATGGGTGGTGTCAATATGTTCGGAACAGGACCAAGAAGTGATAGAGATAACTCTCTGGGTGACTGGAAGCCTCTTAAATGGACCCGCTCTGGAAGCTTGTCATCTCGAGGCTCAGGTTTTAGCCACTCAAGTAGCTCAAGGAGCATGGGAGGAGCAGATTCCCATGAAGTGAAGGCTGAGTTGCTACCCAAAAGTGTGGCTGCTAATGAGTCGCATTCAGGGGAAGCTGCTGCTTGTGCAACATCTTCTGTGCCATCCGAGGATACAACTTCCAGAAAAAAGCCTAGGCTGGGTTGGGGCGAGGGACTTGCAAAGTATGAGAAGAAGAAAGTCGAGGTGCCTGATGCAAGTGCAAACAAGGAAGGTCCTGTCTTGTCTACTAGCAACACGGAACCTTGTAATCTCCTCAGTCCCAGCTTAGTTGATAAAAGCCCAAAACTTTTAGGATTCTCAGAATGTGCATCTCCTGCAACTCCATCTTCTGTTGCCTGCAGTTCCTCACCTGCAGGTATGGATGATAAATTATTTGGGAAGACTGCAAATGTGGACAATTATGCTAGTAATTTGACTGGTTCGCCTGCTCCTGTGTCTGAAAGTCATTTTGCTAGGTTTTCTTTTAACTTAGAGAAATTTGATATTGACTCCTTGAATAATTTGGGTTCTTCAATTATTGAGTTGGTACAATCTGATGATCCAACTTCTCTGGATTCTGGTCCAATGAGGTCCAATTCAATTAATAAGTTACTGATATGGAAAGCTGACATTTCAAAGGTGTTGGAGATGACTGAATCTGAAATAGATTTACTTGAAAATGAACTGAAGTCACTAAAATCTGAATCTGGGGAAACATGTCCTTGTCCATGTCCAGTAACCTTGGGCTCCCAGATGGTAGGTAGTGATGAAAAATCCTGTGAAGAACATGTTGGGGTCTCTGATCAGGTCATCCGGCCAGTACCGTTGAAAATTGTTGATGATCCCAATACGGAGAAGATGCCTCTTTCAACTAATTTACATAGTATTCATGAAAATGGCAAGGAAGAGGACATTGATAGTCCTGGAACAGCTACTTCTAAATTTGTTGAGCCTTTGCCTTTAATTAAAGCAGTTTCTTGTGATACCAGGGGACATGATAACTTCTCCCGGGACTTGGATACTGTTCTGTCTACAGCTGTGAAATGCCTAGTTCCCTGTACTACTAGGAAAGAAGCTAGTGTGCCTGCTTGTGTTGATGGCAATATCTCTATGGAGCTAAAGGATAGCATGGATATTTTATATAAAACAATTATTTCTTCCAATAAAGAATCTGCCAACAGAGCTAGTGAGGTATTTGATAAGTTATGGCCCAAAGATTGTTGCAAGATTGAAAAGATGGAAGCAAGCAGTGACGCATGCACTCATACCTTCATCATGGAAAAATTTGCTGAGAGAAAGCAATTTGCAAGATTTAAGGAGAGAGTTATTGCACTTAAATTCAGAGCCTTGCATCACCTGTGGAAAGAAGATATGCGCTTACTGTCTATCAGGAAATGCAGACCAAAATCTCACAAAAAAAATGAACTAAGTGTGCGATCTACCTGTAATGGTATCCAGAAGAATCGATCATCCATTCGGTCACGTTTCCCCTTTCCTGCAGGAAATCAACTAAGCTTGGTTTCAACATCAGAGATAATCAATTTTACAAGCAAACTGCTTTCAGAATCCCAAGTTAAAGTGCAGAGAAACACCCTGAAAATGCCAGCATTAATTTTGGATGAAAAAGAGAAGATGATTTCCAAGTTTGTATCCAGTAATGGGTTGGTTGAAGATCCATTGGCTATCGAGAAAGAAAGGACTATGATCAATCCTTGGACCCCAGAAGAGAGAGAAGTTTTCTTGGAGAAATTTGCTGCCTTTGGAAAAGATTTTCGGAAAATTGCTTCTTTTTTTGACCACAAGACAACTGCTGACTGTGTTGAATTCTACTACAAAAATCATAAGTCTGATTGTTTTGAGAAAATTAAGAAGCAAGATGGTGATAAGCTTGGGAAGTCATATTCTGCCAAAACTGACTTGATTGCATCAGGTAAAAAATGGAACCGTGAATTGAATGCTTCTTCGCTTGATATTTTGAGTGCAGCCTCATTGATGGCAGATGGCATTGCAGGTAATAAAAAATTGCGGGCAGGAAGCTCACTTTTGGGTGGATATGGTAAAGTGAAGACGTATAGGGGTGAGGACTTCATAGAGAAATCAAGCAGTTTTGACATTCTTGGGGATGAAAGAGAGACTGCTGCTGCAGCTGATGTATTGGCTGGTATATGTGGTTCTCTTTCATCTGAGGCTATGAGTTCCTGCATAACAAGTTCAGTGGATCCTGTAGAAGGTAACAGGGATAGGAAGTTCCTGAAAGTAAACCCTTTATGCAAACTGCCCATGACACCTGATGTTACTCAAGATGTTGATGATGAGACTTGTTCAGATGAGAGCTGTGGTGAAATGGATCCAACAGATTGGACCGATGATGAGAAAACTGCTTTTCTTCGGGCTGTATCATCTTTTGGGAAGGATTTTGCCAAGATAGCACGGTGTGTTGGGACAAGGTCCCAGGAACAGTGCAAAGTTTTCTTTAGCAAGGGCCGGAAATGCCTTGGATTAGATCTCATGCGCCCAATACCTGAGAATGTTGGATCCCCAGTTAATGATGATGCAAATGGGGGTGAGAGTGACACAGATGATGCATGTGTTGTTGAGACAGGCTCGGTGGTTGAAACTGATAAGTCTGGCACTAAAACAGATGAGGACCTTCATTTGTATGGCACAAACACATACCATGATGAATCCCATCCTGTGGAAGCTAGGAACCTGTCAGCTGAATTAAATGAATCAAAGGAAATTAATTGGACAGAAGTAGATCTTGAAGATGCAAATGTCACTTCTGGTGCTTGTCAAATCAATATTGATTCTAAACAGGGCTGTGATGGTAGTGAAGTTTTCTTGTGTGGTTCTAACAAGTCTGGATCTGTTGGTGAACGAGCAGATATAATTATGTCAGATAGCACAGAAGTTGAAAATGATAAAGCAAATAAATTGGGAGGTGCAGCTACAGAATTGATTTCTGCTCCAAATACAAGGGAACCATGCCAGAGTAATTCCATTGCTGAGGATAGAATGGTGGTTTCTGAGGTATCTTCTGGCGGTCTTGGAAATGAATTGGAGAGGCATAGAGTGTCTTCTACCCTATGTGTTGATGATAGAGATAATAAGCATGAAGCTGATTCAGGTGTTATAGTTGATATGAAAAGCTCTGTGCATGATTTAAGCACTATGATAAATTCTTCAATCTCATCTTTGGGCAATTCTTGTTCAGGATTGAGTTTTAGTTCTGAAAATAAGCATGTGCCCCTTGGAAATCCTCATGTCTCTGCATTGTCTATGGACAACCTTCATGCACTTTTGCAAAATACAGTTGCTGTTGATGTTCAATGTGAGAAAACTGCTAGCCAAGATCAAATGTCCTCTACTTGTGATATTCGGGGAGGTAGAGATATGCACTGTCAGAATTCCATTAGCAATGGTGACCATCAGCATATTACTGGGAATTTATCAGACCACGTTGATGCTGTTAGCATTCTCCAGGGATATCCCTTGCAAGTTCCTGTGAAGAAAGAAATGGACAGTGATATGAATTGCACCAGTTCAGCAACTGAATTGCCTCTTCTGCCCCAAAAGATTGAACATGATGATGATCATATCAAAGCATTCCAGTCGTCAGATTCAGATAAAACATTCAGAAATGGTGATGTGAAACTGTTTGGGAAGATACTAACCAATCCTTCAACCACCCAGAAACCTAATGTGGGTGCTAAAGGGAGTGAAGAAAATGGTACCCATCATCCTAAGTTAAGCAGCAAGTCTTCTAATCCGAAAATTACTGGCCATCATAGTGCTGATGGAAATTTGAAAATTTTGAAGTTTGACCATAATGATTATGTTGGCCTTGAAAATGTTCCCATGAGGAGTTATGGTTATTGGGATGGGAACAGAATACAGACTGGTCTCTCGACATTGCCTGATTCTGCCATCTTGCTAGCAAAGTATCCCGCAGCCTTCAGTAATTATCTCACGTCTTCTGCCAAATTGGAGCAACCGTCATTGCAGACATATTCCAAGAATAATGAACGGCTCCTGAATGGTGCATCCACTTTTACGACTAGAGACATCAATGGCAGCAATGCTTTGATCGATTATCAGATGTTTAGAAGGGATGGTCCAAAAGTGCAACCATTTATGGTAGATGTCAAGCACTGCCAAGATGTATTCTCTGAGATGCAGAGAAGAAATGGTTTCGAAGCAATCTCAAGTTTACAGCAGCAGAGCAGGGGAATGAATGGTGTTGGAAGACCGGGGATTCTTGTGGGAGGATCTTGCAGTGGGGTCTCAGATCCTGTGGCTGCAATCAAAATGCATTATTCCAATTCTGACAAGTATGGTGGTCAGACTGGGAGTATTGCAAGAGAGGATGAATCATGGGGAGGGAAAGGGGATTGA 5040 0.4278 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHHRDFNRWGSAEFRRPPGHGKQGGWHLFSEEPGHGYAISRSSSDKMLEDDSRPSISRGDGKYGRSSRENRGGPFGQRDWRGHSWEPNNGSMNFPRRLQDVNNDQRSVDDALAYSSHPHSDFGNAWDQHHLKDQHDKMGGVNMFGTGPRSDRDNSLGDWKPLKWTRSGSLSSRGSGFSHSSSSRSMGGADSHEVKAELLPKSVAANESHSGEAAACATSSVPSEDTTSRKKPRLGWGEGLAKYEKKKVEVPDASANKEGPVLSTSNTEPCNLLSPSLVDKSPKLLGFSECASPATPSSVACSSSPAGMDDKLFGKTANVDNYASNLTGSPAPVSESHFARFSFNLEKFDIDSLNNLGSSIIELVQSDDPTSLDSGPMRSNSINKLLIWKADISKVLEMTESEIDLLENELKSLKSESGETCPCPCPVTLGSQMVGSDEKSCEEHVGVSDQVIRPVPLKIVDDPNTEKMPLSTNLHSIHENGKEEDIDSPGTATSKFVEPLPLIKAVSCDTRGHDNFSRDLDTVLSTAVKCLVPCTTRKEASVPACVDGNISMELKDSMDILYKTIISSNKESANRASEVFDKLWPKDCCKIEKMEASSDACTHTFIMEKFAERKQFARFKERVIALKFRALHHLWKEDMRLLSIRKCRPKSHKKNELSVRSTCNGIQKNRSSIRSRFPFPAGNQLSLVSTSEIINFTSKLLSESQVKVQRNTLKMPALILDEKEKMISKFVSSNGLVEDPLAIEKERTMINPWTPEEREVFLEKFAAFGKDFRKIASFFDHKTTADCVEFYYKNHKSDCFEKIKKQDGDKLGKSYSAKTDLIASGKKWNRELNASSLDILSAASLMADGIAGNKKLRAGSSLLGGYGKVKTYRGEDFIEKSSSFDILGDERETAAAADVLAGICGSLSSEAMSSCITSSVDPVEGNRDRKFLKVNPLCKLPMTPDVTQDVDDETCSDESCGEMDPTDWTDDEKTAFLRAVSSFGKDFAKIARCVGTRSQEQCKVFFSKGRKCLGLDLMRPIPENVGSPVNDDANGGESDTDDACVVETGSVVETDKSGTKTDEDLHLYGTNTYHDESHPVEARNLSAELNESKEINWTEVDLEDANVTSGACQINIDSKQGCDGSEVFLCGSNKSGSVGERADIIMSDSTEVENDKANKLGGAATELISAPNTREPCQSNSIAEDRMVVSEVSSGGLGNELERHRVSSTLCVDDRDNKHEADSGVIVDMKSSVHDLSTMINSSISSLGNSCSGLSFSSENKHVPLGNPHVSALSMDNLHALLQNTVAVDVQCEKTASQDQMSSTCDIRGGRDMHCQNSISNGDHQHITGNLSDHVDAVSILQGYPLQVPVKKEMDSDMNCTSSATELPLLPQKIEHDDDHIKAFQSSDSDKTFRNGDVKLFGKILTNPSTTQKPNVGAKGSEENGTHHPKLSSKSSNPKITGHHSADGNLKILKFDHNDYVGLENVPMRSYGYWDGNRIQTGLSTLPDSAILLAKYPAAFSNYLTSSAKLEQPSLQTYSKNNERLLNGASTFTTRDINGSNALIDYQMFRRDGPKVQPFMVDVKHCQDVFSEMQRRNGFEAISSLQQQSRGMNGVGRPGILVGGSCSGVSDPVAAIKMHYSNSDKYGGQTGSIAREDESWGGKGD* 1680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1909 1679 MobiDBLite consensus disorder prediction 78 110 - -
Gso10g1909 1679 ProSiteProfiles SANT domain profile. 1000 1040 IPR017884 -
Gso10g1909 1679 Gene3D - 975 1053 - -
Gso10g1909 1679 SMART sant 998 1046 IPR001005 -
Gso10g1909 1679 SMART sant 783 831 IPR001005 -
Gso10g1909 1679 MobiDBLite consensus disorder prediction 1439 1477 - -
Gso10g1909 1679 Pfam Myb-like DNA-binding domain 786 827 IPR001005 -
Gso10g1909 1679 Pfam Myb-like DNA-binding domain 1001 1040 IPR001005 -
Gso10g1909 1679 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1655 - -
Gso10g1909 1679 CDD SANT 1002 1040 IPR001005 -
Gso10g1909 1679 ProSiteProfiles SANT domain profile. 782 833 IPR017884 -
Gso10g1909 1679 SUPERFAMILY Homeodomain-like 999 1048 IPR009057 -
Gso10g1909 1679 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1655 - -
Gso10g1909 1679 Gene3D - 763 835 - -
Gso10g1909 1679 MobiDBLite consensus disorder prediction 8 45 - -
Gso10g1909 1679 MobiDBLite consensus disorder prediction 1660 1679 - -
Gso10g1909 1679 MobiDBLite consensus disorder prediction 118 144 - -
Gso10g1909 1679 SUPERFAMILY Homeodomain-like 770 830 IPR009057 -
Gso10g1909 1679 MobiDBLite consensus disorder prediction 199 222 - -
Gso10g1909 1679 MobiDBLite consensus disorder prediction 1 150 - -
Gso10g1909 1679 MobiDBLite consensus disorder prediction 1439 1453 - -
Gso10g1909 1679 MobiDBLite consensus disorder prediction 170 226 - -
Gso10g1909 1679 Coils Coil 423 450 - -
Gso10g1909 1679 MobiDBLite consensus disorder prediction 239 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1909 Gso-Chr10 46045430 46053918 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gso10g1909 Myb_DNA-binding 1.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1909 - - gmx:100806246 3340.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1445 20 44660360 44669050 Gso10g1909 10 46045430 46053918 GST