Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1894 ATGCGGTCAATTCCTCTGGGAACCTCAGTATCTCCAACTCCTATAAACACCTCAAAGTTATCACCTTTCAGTGTTAATTTTAAGAAACCAACCACTTTCCCATCTTGGGGTTCAACTCCTCCTCATGAATTCTCTCTCTCCCAATCAGGATTATGTAGAGCAAGTCAAGTTGTTGATTTGTTCCCGACTGTGTCTCCTGAAATTATTGTTCGGGAGGCCAGGCTAGAGGACTGTTGGGAAGTGGCAGAGACTCACTGCAGCTCCTTCTTCCCTGAATATTCCTTCCCATTAGATTTTGTGCTGAGAATGGACAGATTGGTGGCCATGATGGCAGGATTCACTCTACCAAACGGTTGCAAGAGAATTTGTTTGGTTGCCGTTACTGGCAACTCATTTGGTGAAACTGTATTATTTGGAAGTGAAGATTTCAAGGTTGGTGGTTTTGATGGGAAAATCAGCCTCAACAAGGGATATGTGGCTGGTATATTAACAGTGGATACTGTTGCAGACTTTCTTCCTAGGAAGGGGCCATTGCGACAGAGAAGGACTGGAGTTGCATACATATCGAATGTGGCAGTCCGGGAAAAATTTAGGCGAAAGGGAATAGCTAAACACTTGGTAGCAAAGGCAGAATCACAAGCCAGAAGTTGGGGGTGTCGTGCTATTGCATTGCACTGTGATTTGAAAAACCCTGCAGCCACAAAGTTATACCAAGGCCAAGGTTTCAGGTGTATAAAGGTTCCAGAAGGAGCTAACTGGCCACATCCAAAGACCTCACCGGATGTAAAGTTCAACTTCATGATGAAGCTTCTCAACAATTCAACTGTTTCTAAATGA 837 0.4409 MRSIPLGTSVSPTPINTSKLSPFSVNFKKPTTFPSWGSTPPHEFSLSQSGLCRASQVVDLFPTVSPEIIVREARLEDCWEVAETHCSSFFPEYSFPLDFVLRMDRLVAMMAGFTLPNGCKRICLVAVTGNSFGETVLFGSEDFKVGGFDGKISLNKGYVAGILTVDTVADFLPRKGPLRQRRTGVAYISNVAVREKFRRKGIAKHLVAKAESQARSWGCRAIALHCDLKNPAATKLYQGQGFRCIKVPEGANWPHPKTSPDVKFNFMMKLLNNSTVSK* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1894 278 Gene3D - 66 246 - -
Gso10g1894 278 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 275 - -
Gso10g1894 278 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 68 273 IPR000182 GO:0016407
Gso10g1894 278 CDD NAT_SF 184 225 - -
Gso10g1894 278 Pfam Acetyltransferase (GNAT) family 159 242 IPR000182 GO:0016407
Gso10g1894 278 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 62 247 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1894 Gso-Chr10 45837133 45840428 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso10g1894 Acetyltransf_1 7e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1894 - - gmx:100305894 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1456 20 44838242 44841070 Gso10g1894 10 45837133 45840428 GST
Gso2g0614 2 6368023 6371346 Gso10g1894 10 45837133 45840428 PCT
Gso10g1894 10 45837133 45840428 Gso2g0614 2 6368023 6371346 PCT