Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1884 ATGGAAATCACAATTACATCAAGAGAAACAATCAAACCATTGTTCCCCACACCAGATGAACACAAATTCTTCCAACTCTCTTTGTTTGATCAGCTTCAACTTGTCACCTATTTGCCAATGGTTATGTTTTACCCCAACAAGGTGGGGTTCCCTGAACCCTCTCATATCTGTGCTCAATTGAAACAATCACTGTCTGAGACACTAACAATTTTCTACCCTGTAGCAGGCAGAAGAGAAGACCACACTTTCATCACTTGTAATGATGAGGGTGCACTTTACTTGGAAGCCAAGGTGAACCTTAACATGGTTGAGTTCCTCACACCACCTAAGCTAGAATTTCTAAACAAATTGCTCCCACGTGAGCCTAACAAGATGCACTCACATAGAGAAACCTTGCCCCAAGTACTTTTACAAGTGAACATATTCAATTGTGGTGGAATAGCTATAGGCACATGTAATCTCCATACTCTTCTTGATGGTTGCTCTGGAAGCCTCTTTCAAACTACTTGGGCCGCTATATGCCGTGGCTCTAAGGAGGAAGTTCCATCTCCTGATTTAAGTTCTGCCTCTTCTTTCTTTCCACCATTGAATCATTTGAGTTTGCATAACCATGCTAATCAAAATAATGAGGATTCAAGTGCACAAAAAATGTGCACCACTAGAAGGTTTGTGTTTGGTGTTGAATCCATCAACACTCTAAGAGCTGAAGCAAAAGACGGTGATTATGATGAAAGCTCAAAGCCTCTTACCAGATATGAAGCACTGACTGCATTCATTTGGAAACACATGACACTTGCATGCAAGATGGAGTCTGATAGCACAAGACCAGCAGTGGCTATCCATATTGTGGACATGAGAAGGAGGATTGGTGAACCTTTCTCTAGATACACCATTGGTAACATTTTGTGGCCAGTGATGGTGTTTTCTGAAACAGTCAATGCAGACACTAGTGTTAGATATTTGGTCAGCATTGCCAGGGAGAAATTTGGAAAGCTTTCAAGGGAGTTGTTTTTAAGAGTGAAAAGTGATCCTAATATCCTAGGGAGCACTCAGTGTGTGGATCTGCCTCAAGGTATTGAAACAATAAGTCCAATTCCAATTGTGCTGACAAGTTGGTGTGGCTTGAATTTCAGTGAACTAGATTTTGGTTTTGGGAAGCCTTTGTGGGTTGGTGTTAGAGGAGGGGATCAGGAAACTCTCCCCAATGTAGCTGTTATCATGGAAACAGATGAAGGCATGGAAGCTTGGTTGACAATGGAAATGCAACATATTGCTAACTTGGAAAGAGACGTTGAGTTTCTCAGATTAGCTTTGCCTAATCCTAGTGTTTCAAACATCTAG 1341 0.4146 MEITITSRETIKPLFPTPDEHKFFQLSLFDQLQLVTYLPMVMFYPNKVGFPEPSHICAQLKQSLSETLTIFYPVAGRREDHTFITCNDEGALYLEAKVNLNMVEFLTPPKLEFLNKLLPREPNKMHSHRETLPQVLLQVNIFNCGGIAIGTCNLHTLLDGCSGSLFQTTWAAICRGSKEEVPSPDLSSASSFFPPLNHLSLHNHANQNNEDSSAQKMCTTRRFVFGVESINTLRAEAKDGDYDESSKPLTRYEALTAFIWKHMTLACKMESDSTRPAVAIHIVDMRRRIGEPFSRYTIGNILWPVMVFSETVNADTSVRYLVSIAREKFGKLSRELFLRVKSDPNILGSTQCVDLPQGIETISPIPIVLTSWCGLNFSELDFGFGKPLWVGVRGGDQETLPNVAVIMETDEGMEAWLTMEMQHIANLERDVEFLRLALPNPSVSNI* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1884 446 Pfam Transferase family 1 433 - -
Gso10g1884 446 PANTHER F21J9.9 4 441 - -
Gso10g1884 446 Gene3D - 1 204 IPR023213 -
Gso10g1884 446 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 4 441 - -
Gso10g1884 446 Gene3D - 216 435 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1884 Gso-Chr10 45721928 45723524 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1884 60 429 Monolignol Biosynthesis Gene Families AT5G48930 24.156 5.39e-21 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1884 - K13065 gmx:102668997 903.279