Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1881 ATGGCAGTTTTCGACCCTTCTGCTCCTCTGGACAAAACCTTCTCAGTGGTCAAAAACCTCTGCGCTTCTCTCTCAAGTCTCAAAGACACGCTCCCTGAAAACCCTAACATCTACCACTTCTCTGAGATCTCCGCCGCAACCGCCAATTTCTCCGCGCCACGCCTTTCCTCTTCCTCCTGGCGCTGCGTAATTCGTCACCGCGAAGTCGTCGTTTCGCGCCGCGACTTCCGCCGTCAAATTGATATCCCGGAGCTCAGCCGCCGCCTCGCCCTCATCTGCCGGAGTCACCACAGCAGCCTCTTGAAACTCCTCGGCGCGTCGGTCTCTGGCGCCGTCATCTTCCTCGTCAACGAGTTCGTCCCCGGCGCCAGCCTCGCCGACTGCCTCCGCAACCGCCGGAACCCTAGCTTCACCGATCTCAACACGTGGATCTCTCGGATGCAGATCGCGTCCGACGTGGCGCACGGTCTCGATTACATCCACAATTTCTCTGGTTCCGGTTCGGATTCCGGTTCCGGATCAGGATCCGGATTCGTTCACAAGCACATCAAGAGTTCGAGCATTGTTATCACGGAGGAGAATCTGCGCGCGAGAATCTGCCACTTCGGCGTGTCGGGTCTCTGCGGCGAGGCCGTCGCCGGCGACGGCGATCCTTCTGGCGGCCGGACTGTGAGGATCGAGGGGAGGAGAGGCTACATGGCGCCGGAGTTTCAGATCAGCGGCGTCGCGACGAAGAAGAGCGACGTGTACGCTTTCGGAGTGGTGGTTTTGGAGCTGCTGAGCGGGGAAGAGGCGGTGAAGTTCGAATTCAACGACGACGGCGGTTATCGCAGGATTAGCGTGGTGGAGACGGCAAAGATTGCGGCGGAGGAGAACGGCGGCGTGAGGAAGTGGGTGGATACGAGGCTGAGGGATTCATTTCCCGTGAATGTTGCGGAGAGAATGATTCGGGTCGGATTGGAATGTGTCGGGGATGACCCGAATGAGAGACCCGATATGGGTTGGGTTTCTGATGAGGTGTCGAAGTTGTATTTGGATCTCGTTGGCCCCACGGTGACTTCTTTTGGTTGGGTTTGA 1077 0.5831 MAVFDPSAPLDKTFSVVKNLCASLSSLKDTLPENPNIYHFSEISAATANFSAPRLSSSSWRCVIRHREVVVSRRDFRRQIDIPELSRRLALICRSHHSSLLKLLGASVSGAVIFLVNEFVPGASLADCLRNRRNPSFTDLNTWISRMQIASDVAHGLDYIHNFSGSGSDSGSGSGSGFVHKHIKSSSIVITEENLRARICHFGVSGLCGEAVAGDGDPSGGRTVRIEGRRGYMAPEFQISGVATKKSDVYAFGVVVLELLSGEEAVKFEFNDDGGYRRISVVETAKIAAEENGGVRKWVDTRLRDSFPVNVAERMIRVGLECVGDDPNERPDMGWVSDEVSKLYLDLVGPTVTSFGWV* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1881 358 SUPERFAMILY Protein kinase-like (PK-like) 68 340 IPR011009 -
Gso10g1881 358 PANTHER OS09G0572100 PROTEIN 16 346 - -
Gso10g1881 358 Gene3D Transferase(Phosphotransferase) domain 1 60 351 - -
Gso10g1881 358 ProSiteProfiles Protein kinase domain profile. 49 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1881 358 PANTHER OS09G0572100 PROTEIN 16 346 - -
Gso10g1881 358 Pfam Protein tyrosine and serine/threonine kinase 80 334 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1881 Gso-Chr10 45681167 45686264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1881 33 345 Receptor kinase-like Gene Family AT1G51940 31.385 1.25e-41 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gso10g1881 PK_Tyr_Ser-Thr 1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1881 - - gsj:114371805 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1468 20 45000464 45002269 Gso10g1881 10 45681167 45686264 GST