Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1875 ATGAATAACTCTGTTTCAGAAAACAGTTTCATCATTGAGAGTGATGAAGAAGACGAGGAGAAGGATTTGAACAAAGGTGAAGGTGGTGGAAACGATTCTGATTCTTCCAATTACTCAAATGAAAACCCTCCACAGAGAAAGCCCAGTTCTTACAACATCTCATGGCCTCAGAGTTACAGGCAATCTATTGATCTATATAGTAGTGTGCCATCACCAAACATTGGATTTTTGGGCACACCCTCATTGTCAAGACTAAGCAGTTCTTTCCTTTCTACATCACTAACAAGGAGGCACACTCCTGAAGCACTTCCTTCATTGACAAAGCCTCTGATACAACAAGACACAGAAGATGAGCAGCATCAGAGACGTAGCTCTCATACCTTGCTTCCTCCTCTTCCTTCTAGAAGGTCTTCTTTGATTAAGAAGGATTCCAAGGTTGCTCATCTTGAAGTTCCCTCTCGCCACTGCTCTTTTGGGCAAGCTATGCTTAATGGCATAAATGTTCTTTGTGGTGTTGGAATCCTTTCTACACCTTATGCTGCCAAAGTAGGTGGATGGCTTGGGCTTTCTATATTGGTCATTTTTGCAATTATTTCATTTTATACTGGGCTGCTCTTGCGTTCCTGCCTGGACAGTGAACCTGAGCTTGAGACGTATCCTGATATTGGCCAAGCTGCATTTGGTACTACTGGACGTATTGCCATTTCAATAGTATTGTACGTGGAATTATATGCTTGTTGCATTGAATATATAATTTTGGAGGGTGACAATTTGTCTTCTTTATTTCCAAGTGCACACTTGAATTTGGGTGGAATTGAACTGAATTCACGTACTTTGTTTGCTGTGATTACTACCTTGGCTGTTCTTCCTACTGTTTGGCTCCGTGACCTAAGCATTCTCAGTTACATATCCGCTGGTGGAGTTGTTGCATCGATTTTAGTGGTTCTCTGCTTGTTATGGGTTGGCATAGAGGACGTAGGCTTTCATAGCAAAGGGACCACACTCAATCTTTCAACTCTTCCTGTTGCTGTTGGTCTTTATGGTTACTGCTACTCTGGACATGCAGTGTTCCCGAACATTTATACATCCATGGCAAATCCAAACCAATTTCCTGGAGTGCTCTTAGCATGTTTTGGTATTTGTACCTTATTGTATGCTGGGGCTGCTGTAATGGGATACACAATGTTTGGAGAAGCTATACTGTCTCAGTTCACTCTCAACATGCCTAAAGAATTGGTAGCCACAAATATTGCTGTCTGGACTACGGTGGTTAATCCATTTACCAAGTATGCATTGACTATATCTCCAGTGGCAATGAGTCTGGAGGAGTTGATACCGTCAAACCATGCCAAGTCTTATCTATATTCCATCTTCATCAGAACAGGGCTGGTTCTTTCTACCCTATTTATTGGTCTCTCAGTTCCCTTTTTTGGTCTGGTGATGTCATTGATTGGATCATTACTCACAATGCTTGTTACTTTGATACTACCCTGTGCTTGTTTCCTAAGAATCTTGCGGGGCAAAGTGACACGAATACAGGCAGCACTTTGCATTACAATTATCACAGTAGGTGTTGTATGTTCTGCTTTTGGAACATACTCCGCCCTCTCCGAGATTGTGAAGAGTTTGAGGGAGTGA 1638 0.4206 MNNSVSENSFIIESDEEDEEKDLNKGEGGGNDSDSSNYSNENPPQRKPSSYNISWPQSYRQSIDLYSSVPSPNIGFLGTPSLSRLSSSFLSTSLTRRHTPEALPSLTKPLIQQDTEDEQHQRRSSHTLLPPLPSRRSSLIKKDSKVAHLEVPSRHCSFGQAMLNGINVLCGVGILSTPYAAKVGGWLGLSILVIFAIISFYTGLLLRSCLDSEPELETYPDIGQAAFGTTGRIAISIVLYVELYACCIEYIILEGDNLSSLFPSAHLNLGGIELNSRTLFAVITTLAVLPTVWLRDLSILSYISAGGVVASILVVLCLLWVGIEDVGFHSKGTTLNLSTLPVAVGLYGYCYSGHAVFPNIYTSMANPNQFPGVLLACFGICTLLYAGAAVMGYTMFGEAILSQFTLNMPKELVATNIAVWTTVVNPFTKYALTISPVAMSLEELIPSNHAKSYLYSIFIRTGLVLSTLFIGLSVPFFGLVMSLIGSLLTMLVTLILPCACFLRILRGKVTRIQAALCITIITVGVVCSAFGTYSALSEIVKSLRE* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1875 545 MobiDBLite consensus disorder prediction 101 136 - -
Gso10g1875 545 MobiDBLite consensus disorder prediction 29 53 - -
Gso10g1875 545 PANTHER - 26 542 - -
Gso10g1875 545 PANTHER OS05G0424000 PROTEIN-RELATED 26 542 - -
Gso10g1875 545 Pfam Transmembrane amino acid transporter protein 156 535 IPR013057 -
Gso10g1875 545 MobiDBLite consensus disorder prediction 1 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1875 Gso-Chr10 45624427 45633193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1875 1 478 Amino Acid or Auxin Permease AAAP Family AT2G39130 69.628 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1875 K15015 - gmx:100810530 996.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1475 20 45055056 45062416 Gso10g1875 10 45624427 45633193 GST