Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso10g1857 | ATGGGAAGAAAGGCCAATTGTGACAATCAATATGCTATGAACAGAGGTCCTTGGTCTGCTGAAGAAGACAAAATTCTTATGAACGACGTTCAAGTTCATGGGGAAAGAAAATGGAGAGAGCTTTCTAAAAGAGCAGGCTTGAAAAGATGTGGGAAGAGTTGTAGACTCCGATGGCTGAATTATCTCAAGCCAGATATCAAGAGAGGAAACATTTCTTCGGATGAAGAAGATCTCATTATCAGACTACATAAGCTCTTAGGGAATAGATGGTCTCTAATTGCGGGACGCTTACCAGGGCGAACAGACAATGAAATTAAGAACTATTGGAATACTTATTTGAGAAAGAAGACAGAGCACAAGGACAAGCATAACAAAATTCTTAGCCATAACAACAACATTCCTATCAAATTAAGAATTGAATCTCCACAGTGCTCAAAAAATTCCTCTGGTAATGTTCTTGATCCTGCAAAATCCCCTCACCCGATGAGGTGTACCAAGGTTATGATGCCAGTCAATGATTCAGTCAACACAATGAATTTGATTGCAACGAGCTGGGAGAATCATAACCCTTCTGCATCCATGCCACTAGATGACCATAATCATTGCTTAACAGGTGTCCTCCAAGACCTTGACATTAGTGACTTGTTAATGTCGTATGAGGATGATTGTCGTTTTAATGGATATGCTTGTGTCGAAATACCCCAACATATTTTTAAAGATGAGACTTGGAGGCTTGATGATTCGATGGGTGAAGAAGCATGGTATGAGAATTGGAAGATTGACACCTATTTTCCACAAGATATGGGGTTTTCTTCATTTTAA | 822 | 0.3942 | MGRKANCDNQYAMNRGPWSAEEDKILMNDVQVHGERKWRELSKRAGLKRCGKSCRLRWLNYLKPDIKRGNISSDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTYLRKKTEHKDKHNKILSHNNNIPIKLRIESPQCSKNSSGNVLDPAKSPHPMRCTKVMMPVNDSVNTMNLIATSWENHNPSASMPLDDHNHCLTGVLQDLDISDLLMSYEDDCRFNGYACVEIPQHIFKDETWRLDDSMGEEAWYENWKIDTYFPQDMGFSSF* | 274 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso10g1857 | 273 | Gene3D | - | 15 | 67 | - | - | |
Gso10g1857 | 273 | SUPERFAMILY | Homeodomain-like | 13 | 109 | IPR009057 | - | |
Gso10g1857 | 273 | ProSiteProfiles | Myb-like domain profile. | 10 | 62 | IPR001005 | - | |
Gso10g1857 | 273 | SMART | sant | 14 | 64 | IPR001005 | - | |
Gso10g1857 | 273 | SMART | sant | 67 | 115 | IPR001005 | - | |
Gso10g1857 | 273 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 14 | 62 | IPR017930 | - | |
Gso10g1857 | 273 | CDD | SANT | 72 | 113 | IPR001005 | - | |
Gso10g1857 | 273 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 63 | 117 | IPR017930 | - | |
Gso10g1857 | 273 | Pfam | Myb-like DNA-binding domain | 68 | 113 | IPR001005 | - | |
Gso10g1857 | 273 | Pfam | Myb-like DNA-binding domain | 15 | 62 | IPR001005 | - | |
Gso10g1857 | 273 | ProSiteProfiles | Myb-like domain profile. | 63 | 113 | IPR001005 | - | |
Gso10g1857 | 273 | PANTHER | TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 | 1 | 272 | - | - | |
Gso10g1857 | 273 | PANTHER | TRANSCRIPTION FACTOR, PUTATIVE-RELATED | 1 | 272 | - | - | |
Gso10g1857 | 273 | Gene3D | - | 71 | 137 | - | - | |
Gso10g1857 | 273 | CDD | SANT | 17 | 62 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso10g1857 | Gso-Chr10 | 45358455 | 45359623 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso10g1857 | 7 | 116 | MYB Transcription Factor Family | AT3G13540 | 71.818 | 1.32e-55 | 177 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Gso10g1857 | Myb_DNA-binding | 8.1e-14 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso10g1857 | K09422 | - | gmx:100794570 | 585.874 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso20g1487 | 20 | 45299067 | 45300770 | Gso10g1857 | 10 | 45358455 | 45359623 | GST |