Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1854 ATGGCAAGGATCAAACCTCAGGCTCTGCTACAGCAAAGCAAAAGGAAGAAGGGTCCTTCAAGGATAAGCGCCGCGACTGTTATATTTTATTTCTTGATTCTTGCCTTGCTTGGGTTTTTCCTGTTTGCTTCGTACAGACATTGGTCCAGCAGGTCAAGATTGCAATCAGAAGATCACTTGTCAGTCTCCGAGGGTGAAAATACTTTTGTGGACTCCAAGAAATCTGAGCTGCCTGGATATGCTGTTTTAAATACCTCTAAAGGTTCTATAATAATAGAACTGTACAAGGAAAGTGCTCCTGAAGTTGTTGATGAATTCATTGACTTATGTCAAAAAGGGCACTTCAAGGGGATGCTTTTTCACAAAGTAATTAAGCACTACGTGATTCAGGCTGGGGATAACCAAGGACAAGGAGCTACTGAAGACTGGAACTTGAGAGGAAAGCAACATACAATTACTAGTATGAAACATGAAGCATTCATGCTTGGAACTTCCAAGGGCAAACACCACAACAAGGGATTTGATCTTTTCATTACAACTGCACCAATACCAGATCTAAATGAGAAAATTATTGTGTTTGGGCAAGTCATCAAGGGAGAGGATGTTGTCCAGGAAATTGAAGAAGTGGATACAGATGAACATTACAAGCCTAAAGTATCTATCGGGATACTTGATGTGACTCTTAAACAAAAGGTCTGA 699 0.4049 MARIKPQALLQQSKRKKGPSRISAATVIFYFLILALLGFFLFASYRHWSSRSRLQSEDHLSVSEGENTFVDSKKSELPGYAVLNTSKGSIIIELYKESAPEVVDEFIDLCQKGHFKGMLFHKVIKHYVIQAGDNQGQGATEDWNLRGKQHTITSMKHEAFMLGTSKGKHHNKGFDLFITTAPIPDLNEKIIVFGQVIKGEDVVQEIEEVDTDEHYKPKVSIGILDVTLKQKV* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1854 232 CDD cyclophilin 82 225 - -
Gso10g1854 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Gso10g1854 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Gso10g1854 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 175 187 IPR002130 GO:0000413|GO:0003755
Gso10g1854 232 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 188 203 IPR002130 GO:0000413|GO:0003755
Gso10g1854 232 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 77 228 IPR002130 GO:0000413|GO:0003755
Gso10g1854 232 Gene3D - 66 232 IPR029000 -
Gso10g1854 232 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 232 - -
Gso10g1854 232 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 82 226 IPR002130 GO:0000413|GO:0003755
Gso10g1854 232 SUPERFAMILY Cyclophilin-like 78 228 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1854 Gso-Chr10 45301842 45309869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1854 79 228 U-box Gene Family AT5G67530 29.412 2.57e-18 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1854 - - gmx:100803596 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1490 20 45336526 45341633 Gso10g1854 10 45301842 45309869 GST