Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1851 ATGATGCCCCCTGAGCAAGAAACCACTAATATTGCACCAAAAGTTCCAGCCATCACAACCCGACAAGAGACCAGCTCGATCCACCATGATTCAGAGGGTTCAAACACTAACAAAATCAAACCAAGTTTAGAATTGGATGATAATTGCATTCCTGCGCAGCAACAGACTCAGCCAACACCACCACCACCAACAACATCAAGATTTTCCGTTCTTCACCAATCCTTGCGCCCCATTACCCTCAAATTTGAAGACGTATCTTACACCATAACCTTCGAAAGCCAAAAGAAGAAGGGTTGCGTCTTACGTAAAGAATCAAAGCTAAGAAGAAAAGTCCTAACCGGAGTAACCGGAGTAGTGAACCCCGGAGAGTTAACGGCAATGCTGGGTCCCTCCGGCAGCGGCAAGACGACCCTCTTGACCGCCCTGGCCGGAAGACTCGCCGGAAAAGTCTCCGGCACCATAACCTACAACGGCCAAACCGACCCCACCTTCGTGAAACGCAAGGTAGGGTTCGTTCCCCAAGACGACGTTCACTACCCTCACCTCACAGTGTTAGAGACTTTAACCTACGCAGCGTTATTGAGACTTCCGAAGAGTTTGAGCAGAGAAGAGAAGAAGGAGCACGCGGAGATGGTGATTGCGGAGCTAGGGCTAACACGGTGTCGTAACAGCCCCGTTGGAGGGTGCATGGCTCTGTTCCGTGGCATTTCGGGTGGGGAACGGAAACGGGTCAGTATCGGGCAGGAGATGTTGGTCAACCCGAGTTTATTGTTTGTTGATGAGCCCACCTCGGGTTTGGACTCCACCACGGCCCAACTTATCGTGTCGGTGCTCCATGGACTCGCCCGGGCGGGTCGGACCGTCGTCGCCACCATCCACCAGCCCTCCAGCCGATTGTATAGGATGTTTGATAAGGTCATCGTGTTGTCGGACGGGCACCCAATTTATAGCGGGCATGCGGGTCGGGTCATGGACTATCTCGGATCCGTTGGATATGTCCCAGCTTTCAACTTCATGAACCCGGCAGATTTCCTGCTTGACCTTGCTAATGGCGTAGTTGCTGATGTCAAACATGATGATCAAATAGACCACCATGAGGATCAAGCTTCAGTCAAACAGTCCCTAATTTCATCGTTTAAGAAGAACTTATATCCTGCTCTTAAAGAAGACATTCACCAAAATAACAGTCATCCGTCAGCTTTTACATCAGGAACACCTAGACGCTCTGATAACCAATGGACCTCTAGCTGGTGGGAGCAATTCAGGGTGCTTCTTAAGAGGGGTTTACAAGAGAGGAGGCATGAATCTTTTTCTGGCTTAAGGATTTTCCAAGTCTTGTCTGTATCCATTCTCTCAGGACTTCTGTGGTGGCACTCTGATCCTGCCCATGTACAAGATCAGGTGGGACTCCTTTTCTTCTTCTCCATCTTTTGGGGATTCTTCCCTCTCTTCAATGCCATCTTTGCCTTCCCTCTGGAGAGGCCAATGTTAATAAAAGAAAGATCATCAGGGATGTACAAACTCTCCTCATACTATGTTGCTAGGATGGTGGGAGATTTACCAATGGAGCTAGTGCTTCCTACCATCTTTGTAACTATCTCCTACTGGATGGGTGGTCTCAAGCCTTCATTGGTCACATTTGTGCTAACCCTCTTGATCATGCTTTTCAATGTTTTAGTCTCTCAAGGCATAGGCCTAGCACTTGGGGCCATTCTCATGGATGTGAAGCAGGCCACAACACTAGCTTCAGTGACCATGTTGGTGTTTCTCTTGGCTGGTGGCTACTACATTCAGCAAATGCCGGCTTTTATAGCTTGGTTGAAGTACATTTCTTTCAGCCACTACTGCTATAAGCTACTAGTAGGAGTACAGTATTCAGTAAATGAGGTATACGAATGTGGACCAGGGTTGCATTGTAGGGTAAGAGATTTTCCTGCCATAAAGTGTATGGGGCTTGATGATACTATGTGGGGAGATGTGGCTGCATTGACTGTAATGTTGATTGGATACAGAGTTGTGGCATATCTAGCCTTGAGGATGGGGCAGCCTCACTGA 2055 0.4842 MMPPEQETTNIAPKVPAITTRQETSSIHHDSEGSNTNKIKPSLELDDNCIPAQQQTQPTPPPPTTSRFSVLHQSLRPITLKFEDVSYTITFESQKKKGCVLRKESKLRRKVLTGVTGVVNPGELTAMLGPSGSGKTTLLTALAGRLAGKVSGTITYNGQTDPTFVKRKVGFVPQDDVHYPHLTVLETLTYAALLRLPKSLSREEKKEHAEMVIAELGLTRCRNSPVGGCMALFRGISGGERKRVSIGQEMLVNPSLLFVDEPTSGLDSTTAQLIVSVLHGLARAGRTVVATIHQPSSRLYRMFDKVIVLSDGHPIYSGHAGRVMDYLGSVGYVPAFNFMNPADFLLDLANGVVADVKHDDQIDHHEDQASVKQSLISSFKKNLYPALKEDIHQNNSHPSAFTSGTPRRSDNQWTSSWWEQFRVLLKRGLQERRHESFSGLRIFQVLSVSILSGLLWWHSDPAHVQDQVGLLFFFSIFWGFFPLFNAIFAFPLERPMLIKERSSGMYKLSSYYVARMVGDLPMELVLPTIFVTISYWMGGLKPSLVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQQMPAFIAWLKYISFSHYCYKLLVGVQYSVNEVYECGPGLHCRVRDFPAIKCMGLDDTMWGDVAALTVMLIGYRVVAYLALRMGQPH* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1851 684 MobiDBLite consensus disorder prediction 12 43 - -
Gso10g1851 684 Pfam ABC-2 type transporter 419 625 IPR013525 GO:0016020|GO:0140359
Gso10g1851 684 Gene3D - 73 331 IPR027417 -
Gso10g1851 684 ProSitePatterns ABC transporters family signature. 236 250 IPR017871 GO:0005524
Gso10g1851 684 MobiDBLite consensus disorder prediction 1 43 - -
Gso10g1851 684 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 53 681 - -
Gso10g1851 684 SMART AAA_5 121 313 IPR003593 -
Gso10g1851 684 Pfam ABC transporter 113 264 IPR003439 GO:0005524
Gso10g1851 684 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 80 336 IPR003439 GO:0005524
Gso10g1851 684 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 53 681 - -
Gso10g1851 684 CDD ABCG_EPDR 77 318 - -
Gso10g1851 684 Pfam ABC-2 type transporter 293 356 IPR043926 GO:0140359
Gso10g1851 684 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 329 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1851 Gso-Chr10 45273733 45278625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1851 122 318 Calmodulin-binding Proteins AT2G36910 24.138 5.29e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1851 K05681 - gmx:100792991 1330.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1494 20 45387783 45392694 Gso10g1851 10 45273733 45278625 GST