Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1839 ATGTATTTTTTCACTGAGAAAATGCACAGTTTGAAGATGGGCTTCCCTGACTACATCCAAACATTGGAAGAAGAACGCCGTAAGATTCAGGTGTTCTCCAAAGAGCTACCTCTTTCCTTGGAACTGGTCACTCAAGCCATTGAAGCTTGCAAGCAGCAATTGTCTGGAACTGCGAGTGAGTATAATTTGAATGGCCACTCGGAGTGTTCGGAGCAGACAACATCAACGGAAGGGCCTGTTTTGGAGGAGTTTATTCCAATCAAGAAAATGGCATCATCATCCCCTTTTTGTGATGAAGAGGATGAGGATGATGAGCAACATTCTCACAAGCAAAGGGTTTCAAAGGAAAATAATAACAGTGATAAGAGGAAATCCGACTGGCTTAGATCTGTTCAGTTGTGGAATCCAGATCCCCCAGCTGAGGAGGATGTGAATAAGAAAGTGCCTGGATTGGAATTGAAGAGAAGTGGAAATGGTGGTGGTGCTTTCCAGCCATTCCACAAGGAAGAAAGAGGTGCAAAGACAAGTGAATCATTGAGTAAAGCACCCTCTTCAACCTCGGTAGCCGCCGCGAGTTCTAGCGCCGCAGAACCCGCAGCAGAAAAATCTCTGAATGAGGGACAGAGAAAGCAGCGCAGGTGCTGGTCACAGGACTTGCACAAGCGCTTCTTGCATGCCCTTCAGCAGCTTGGGGGTGCAGATACTGCCACACCAAAGCAAATTAGAGAGATAATGAATGTTGATGGCCTCACAAATGATGAAGTCAAAAGCCATTTGCAGAAATACCGTTTGCACACTAGAAGGCCAAGTCCCATGGTTCACAACAGTTCCAATCCACAAGCAGCACCTTTTGTCCTTGTAGGAAACATTTTTGTCCAATCACCAGAATATGCAGCTGTAGCTACCTCAACAGCATCAAGAGAAGTGGCCACAGTTGCAGCACCTGCTGGAATTTATGCACCAGTGGCCACACACCCTACACCTGTTTCACACCCACCAGCTGATTCAATTAAGAATCCACAGTTTAAGAAGGTAAAGCTGTTTGAGCATTCAATTTCAGATGAAAGGGCTAATCACAGTGAAGGAGCTGTTCATTCAAATTCCCCTACCTCATCCTCCTCCACACATACCTCTACTTCCCTTGGCTATTGA 1152 0.4583 MYFFTEKMHSLKMGFPDYIQTLEEERRKIQVFSKELPLSLELVTQAIEACKQQLSGTASEYNLNGHSECSEQTTSTEGPVLEEFIPIKKMASSSPFCDEEDEDDEQHSHKQRVSKENNNSDKRKSDWLRSVQLWNPDPPAEEDVNKKVPGLELKRSGNGGGAFQPFHKEERGAKTSESLSKAPSSTSVAAASSSAAEPAAEKSLNEGQRKQRRCWSQDLHKRFLHALQQLGGADTATPKQIREIMNVDGLTNDEVKSHLQKYRLHTRRPSPMVHNSSNPQAAPFVLVGNIFVQSPEYAAVATSTASREVATVAAPAGIYAPVATHPTPVSHPPADSIKNPQFKKVKLFEHSISDERANHSEGAVHSNSPTSSSSTHTSTSLGY* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1839 383 MobiDBLite consensus disorder prediction 94 212 - -
Gso10g1839 383 MobiDBLite consensus disorder prediction 103 128 - -
Gso10g1839 383 MobiDBLite consensus disorder prediction 348 383 - -
Gso10g1839 383 SUPERFAMILY Homeodomain-like 208 268 IPR009057 -
Gso10g1839 383 Gene3D - 209 267 - -
Gso10g1839 383 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 207 267 IPR017930 -
Gso10g1839 383 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 210 265 IPR006447 GO:0003677
Gso10g1839 383 MobiDBLite consensus disorder prediction 177 193 - -
Gso10g1839 383 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 381 IPR044787 GO:0003700|GO:0006355
Gso10g1839 383 MobiDBLite consensus disorder prediction 362 383 - -
Gso10g1839 383 Pfam Myb-like DNA-binding domain 212 263 IPR001005 -
Gso10g1839 383 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1839 Gso-Chr10 45079322 45081943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1839 17 328 G2-like Transcription Factor Family AT1G68670 46.407 7.93e-80 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso10g1839 Myb_DNA-binding 1.1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1839 - - gmx:100796683 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1508 20 45616524 45619433 Gso10g1839 10 45079322 45081943 GST