Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1831 ATGCAGTCCTCCGCGGAGGAAGGCTCCGGCAACTCCGCCACCGCCGGCACGGAGTGGACGTTCTCCGCAAAGTCCCATGCGCCCTCCTCGGACCCCTCCTGGGACGCCATACAGCGCTGCGGTGGCGCCACCCTGGCACTCGGCGACCTCCGCTTTGTGCAGCGCGTGGGGAGCGGTGACATCGGAAGCGTCTACTTGGTGGAGCTCAAGGGCTCCAACGGTTGCCTCTTTGCGGCCAAGGTGATGGACAAGAAGGAACTCGTTGCCAGGAACAAAGACAGGAGAGCTAAGGTCGAGAGAGAGATATTACAAATGGTGGATCATCCTTTTTTGCCTACTCTTTATGCCTCTCTCGATTCGCCTCGCTGGTCTTACCTCCTCACCGAGTTCTGCCCCGGCGGCGACCTCCACGTCCTCCGCCAGCGCCAGCCCGATAAACGCTTCCACCACGCCGCCGTTAGGTTCTACGCATCTGAAGTAGTGGTTGCGTTGGAGTACCTACACATGATGGGGATAATATACCGTGATTTGAAGCCTGAAAACGTGCTCATAAGATCAGACGGTCACATAATGCTCACAGACTTTGACCTATCATTAAAAGGTAACGATACCACATCAACGGCTCAGATCGTGTTTGATGAAGATCGACCCAGCAACACCGGTAGTAACGAACATTCCAAGAACATGTCATCATGCATGTTGCCGAATTGCATGGTCCCATCGGTCCCATGCTTCCATCCAAAGCAAGGTGGTAGCAAGAGGTCCTCTCGCAGTGGGTCCCTTGAGATCATAGCAGAGCCAATAGAAGTTCGATCAACGTCGTTCGTTGGGACCCACGAGTACTTGGCGCCAGAAGTGATTTCGGGGGAAGGTCATGGGAACGGCGTTGATTGGTGGACATTGGGTGTGTTCATTTTTGAAATGTTCTATGGGATGACACCCTTCAAGGGACTTGAGCATGAGCTAACCCTAGCCAACATAGTGGCTCGAGCCCTTGAGTTTCCTAAGGAGCCGATGATCCCTGGAGCAGCCAGGGATTTGATCTCACAACTTTTGGTGAAGGACTCAAGAATGAGACTAGGGTCTAGAATGGGTGCCGTGGCAATTAAGCACCATCCATTTTTCAACGGGGTCAATTGGCCATTGTTGAGGTGTGCTACCCCTCCCTACATCCCTTCATCAGACAAGTGCAAGGAGTTGCTTCCTCTCTATAATTGCACAAACAACGCTCTAGACTTCTATTAG 1245 0.5309 MQSSAEEGSGNSATAGTEWTFSAKSHAPSSDPSWDAIQRCGGATLALGDLRFVQRVGSGDIGSVYLVELKGSNGCLFAAKVMDKKELVARNKDRRAKVEREILQMVDHPFLPTLYASLDSPRWSYLLTEFCPGGDLHVLRQRQPDKRFHHAAVRFYASEVVVALEYLHMMGIIYRDLKPENVLIRSDGHIMLTDFDLSLKGNDTTSTAQIVFDEDRPSNTGSNEHSKNMSSCMLPNCMVPSVPCFHPKQGGSKRSSRSGSLEIIAEPIEVRSTSFVGTHEYLAPEVISGEGHGNGVDWWTLGVFIFEMFYGMTPFKGLEHELTLANIVARALEFPKEPMIPGAARDLISQLLVKDSRMRLGSRMGAVAIKHHPFFNGVNWPLLRCATPPYIPSSDKCKELLPLYNCTNNALDFY* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1831 414 PANTHER PROTEIN KINASE G11A-LIKE 11 414 - -
Gso10g1831 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Gso10g1831 414 PANTHER FLIPPASE KINASE 1-RELATED 11 414 - -
Gso10g1831 414 Gene3D Transferase(Phosphotransferase) domain 1 271 393 - -
Gso10g1831 414 SMART serkin_6 50 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1831 414 ProSiteProfiles Protein kinase domain profile. 50 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1831 414 CDD STKc_phototropin_like 49 392 - -
Gso10g1831 414 Pfam Protein kinase domain 272 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1831 414 Pfam Protein kinase domain 52 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1831 414 SUPERFAMILY Protein kinase-like (PK-like) 39 392 IPR011009 -
Gso10g1831 414 Gene3D Phosphorylase Kinase; domain 1 49 134 - -
Gso10g1831 414 Gene3D Transferase(Phosphotransferase) domain 1 135 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1831 Gso-Chr10 44999907 45003107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1831 52 414 AGC Kinase Gene Family AT3G44610 62.827 2.62e-174 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gso10g1831 Pkinase 4.7e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1831 K08286 - gmx:100791418 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1513 20 45670996 45674445 Gso10g1831 10 44999907 45003107 GST