Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1830 ATGGAGGAAGGGGTGGAAGCAGATGAAGTGGTAAGGTCATTGAGCAGCTTGAGGATGAACATAGGGTCTTTGAGCAGGAGGAGTTGGGTCTCAGAAACTGTTCCAGAGATGTGGGGTGCTGGTGCTGGACATGGTGGAGATGTTTTTGAGAGAAGCACTAGAGTGGATGATGATAATGATGAAGAGGAGCTCATGTGGGCTGCCATAGAGAGGCTTCCAACATTTGAGAGGCTAAGGAAAAGCATAGTCAAAAGGGTCTTAGAAGAGAGTGGAAGGTTCAATTATGAAGAGGTTGATATATCCAATCTTGGTTTCCAAGGCAAGAAGAAACTCCTCCATGCCATTTTAAGGAATGTTGAAGCTGACAATGAAAGATTTCTTCGTAGAATGAGGGAGAGGATTGATAGGGTCGCTATAGAGATTCCAAAAGTTGAAGTCCGATTTGAGCATTTGTTTGTGGAAGGAGATGCATTTAATGGAACCAGAGCACTGCCAACCTTAGTGAACTCCACCATGAACGCGATAGAGAGAATTCTTGGATCAATTAATCTTCTTCCATCAAAGAAAAGTGTTATCAAGATACTCCAGGATGTTAGTGGAATTGTCAAGCCTGCAAGATTGACCTTGCTTTTGGGGCCTCCAAGATCAGGAAAAACTACACTGCTGCAAGCACTTGCTGGGAAACTGGACAGGGATTTAAGGGTATCCGGAAGAGTCACTTACTGTGGTCACGAATTATCAGAATTTGTTCCTCAAAGAACATGTGCTTATATTAGTCAGCATAATCTTCATCATGGAGAGATGACAGTCAGAGAGACGCTGGATTTTTCTGGGCGCTGCTTGGGAGTTGGAACAAGGCATGAGCTACTATTAGAATTGATAAAGCGAGAAAAGCAAGCAGGACTCAAACCAGATCCAGAGATAGATGCTTTCATGAAAGCCACAGCAGTGGAAGGTCAAGAAACAAGTCTCATTACAGATTATGTTCTCAAGGTTCTTGGATTGGAAATATGTGCTGATACTTTGGTGGGAGATGAGATGAGGAGGGGAATATCTGGTGGAGAAAAAAAGAGGTTAACTACTGGTGAAATGTTAGTAGGACCTTCAAAAGTTTTCTTAATGGATGAGATTTCAACTGGTTTGGATAGTTCCACAACCTTCCAAATTGTCAAGTTCTTGAGGCAGCTAGTGCATGTCATGGATGTTACAATGATAATCTCTCTTTTACAACCTGCACCAGAAACATTTGACCTCTTTGATGACATTATCTTGCTTTCAGAAGGCCACATTATCTACCAAGGTCCACGAGAGAATGTTCTCAATTTTTTTGAGAGCGTAGGCTTCAAATGCCCCGAAAGGAAAGGAATTGCAGACTTTTTACAGGAGGTTACTTCCAGAAAGGACCAAGAGCAGTACTGGTTCGCAAGGGACAAACCATATCGATATGTCAGTGTGCCCGAGTTTGTAGCTCACTTCAACAATTTTGGCATTGGCCAACAACTTTCCCAAGAGCTTAAGGTTCCTTACGACCGTGCCAAAACTCATCCTGCTGCATTGGTTAAAGATAAATATGGGATCTCAAAACTAGAACTCTTCAAGGCATGCTTTGCAAGAGAGTGGCTACTGATGAAGCGCAGTGCTTTCATATACATATTTAAGACTACTCAGATTATGATAATGTCTTTGATTACTATGACAGTGTTTTTTAGGACAGAAATGAGAAGTGGTCACCTTGAAGATGGGAGAAAATATTATGGTGCATTGTTCTTTAGCCTCACTAATATAATGTTCAATGGAATGGCTGAGCTTTCATTGACTATTTTTAGACTTCCCGTTTTCTTCAAGCAGAGAGATTCATTGTTTTTTCCAGCATGGGCTTTTGCAATTCCTATATGGATCTTTCGAATTCCTCTCTCTTTTGTGGAGTCAGGGTTATGGGTTGTCCTTACTTATTATACCGTAGGATATGCTCCAGCTCCAAGTAGATTTTTTCGTCAGTTATTAGCATTCTTTTGCTCTCATCAAATGGGTATGTCTCTGTTCCGATTCATTGCTGCTCTTGGAAGAACACTAGTTGTGGCGAACACATTTGGTTTCTTTGTACTGCTACTTGTTTATGTGCTTGGGGGGTTCATTATTGCCAAAGAAAACCTTGAACCCTGGATGAAATGGGGCTATTATATTTCTCCTATGATGTACGGTCAGAACGCCATTGCCATCAACGAATTCCTCGACGAGAGATGGAGTGCTCCCAACACGGACCATAGAATTCCTGAGCCAACAGTTGGGAAGGCTCTTCTCAGGATTAGAAGCATGTTTACTGAAGACTATTGGTACTGGATTTGCATTGGTGCTCTCCTTGGCTTTTCTCTGCTTTTCAACATTTGTTTTATAATTGCTCTTACATTTCTGAATCCATATGGAGATTCTAAATCTATTATTCTAGAGGAGGAGAATGAGAAAAAGGGAACTACAGAAGAGAGTTTTGCTTCAACTGATAAACCATTTGAAGTAAAAAACACCCGAGAGAGTTCAACTCCCAAAGCAGGCACTGCAACAACCAAGAGGGGATTAGTGTTACCCTTTAAGCCTCTATCACTTGCTTTTGATCACGTGAATTACTACGTCGATATGCCAACTGAAATGGAAAAACATGGAGTTGAAGGTAGTCGGCTTCAACTACTAAGAGATGTCAGTGGTGCTTTCAGGCCTGGAGTACTAACAGCATTAGTAGGTGTAACTGGTGCTGGAAAAACCACATTGATGGATGTTCTAGCAGGACGGAAAACTGGTGGTTATATTGAAGGAAGCATCAGCATATCTGGTTACCCAAAAAAACAAGCAACTTTTGCTCGGATTAGTGGATATTGTGAACAAAATGATATTCATTCTCCACGTATCACAGTGTATGAATCTATTCTGTTTTCTGCTTGGCTGCGTCTTGGTAAGGAGGTCAAGAGAGACATAAGGAAGATGTTTGTTGAGGAAGTTATGAACCTTGTTGAGCTACATCCAGTGAGAGATTTTCAAGTAGGCCTTCCTGGCATAGATGGTTTATCAACTGAACAAAGAAAGAGACTCACCATTGCAGTAGAATTGGTTGCCAATCCTTCTATCATCTTTATGGATGAGCCAACCTCCGGCCTTGATGCTAGAGCTGCAGCAATTGTTATGCGTGCTGTTAGAAACACAGCGGATACAGGGAGAACTATTGTCTGCACAATTCATCAACCAAGCATTGACATATTTGAAGCTTTTGATGAGCTGCTTTTGATGAAGAGAGGAGGACAAATCATATATAATGGTCCCTTAGGTCAACAATCTCAGAAGCTTATAGCGCACTTTGAGACTATTCCGGGAGTTCCTAGAATCAAAGATGGTTATAATCCAGCCACATGGGTTTTGGAGATCACTACTCCAGCAGTTGAGAGTCAGCTTAGAGTAGACTTTGCAGAATTCTACACAAAATCAGAATTGTATCAGAGGAATCAAGAACTTATTGAAGAGCTAAGCACACCTTTAGAGGGAACGAAGGACCTTGATTTCCCTACTAAATACTCCCTTTCCTTTATTACTCAATGTATAGCTTGCTTCTGGAAACAACACTTGTCCTACTGGAGGAATCCACAGTATAATGGCATCCGGTTATTCATGGCAGTAATTATAGGTGTTATTTTTGGACTCATTTTCTGGAAAAAAGGAAATCAAACAGATACGGAGCAAGATCTTATGAATTTAATGGGAGCTATTTTTGCTGCTGTTTTCTTCCTTGGAGGCTCCAACACTTCCAGTGTTCAACCCATAGTTGCAATAGAAAGAACAGTCTTCTACCGTGAAAGAGCAGCTGGAATGTACTCAGCTCTACCTTATGCAATTGCTCAGGTGGCAATTGAATGTATTTATGTTGCAATCCAGACATTTAGCTTTAGTCTTATCCTTTTCTCAATGATGGGGTTCCTTTGGCGAGTTGACAAGTTCTTGTGGTTCTACTTCTTCATGTTCATTTCATTTGTCTACTTCACACTTTATGGCATGATGACTGCGGCTCTGACACCAAATCCCCAAATTGCTGCAATTGTTATGGCCTTCTTTCTAGTGTTTTGGAACATATTCTCAGGTTTCATTATCCCAAAATCGCAAATTCCAATATGGTGGAGGTGGTTTTACTGGGTATGTCCAACTGCCTGGAGTTTATATGGCCTAGTGACATCCCAGGTGGGTGACAAAGATACTCCAATTCTGGTACCTGGAACAGAATCAATGACAGTAAAAGCATTCCTTGAGGAAGAGTTTGGCTATGAATATGGCTTCCTTGGAGTTGTTGCTGTGGCTCATATTGCTTTTGTTGCATTGTTTCTTTTTGTTTTTGCATATAGTATCAAGGTCTTTAATTTCCAGAAGAGATAA 4407 0.4109 MEEGVEADEVVRSLSSLRMNIGSLSRRSWVSETVPEMWGAGAGHGGDVFERSTRVDDDNDEEELMWAAIERLPTFERLRKSIVKRVLEESGRFNYEEVDISNLGFQGKKKLLHAILRNVEADNERFLRRMRERIDRVAIEIPKVEVRFEHLFVEGDAFNGTRALPTLVNSTMNAIERILGSINLLPSKKSVIKILQDVSGIVKPARLTLLLGPPRSGKTTLLQALAGKLDRDLRVSGRVTYCGHELSEFVPQRTCAYISQHNLHHGEMTVRETLDFSGRCLGVGTRHELLLELIKREKQAGLKPDPEIDAFMKATAVEGQETSLITDYVLKVLGLEICADTLVGDEMRRGISGGEKKRLTTGEMLVGPSKVFLMDEISTGLDSSTTFQIVKFLRQLVHVMDVTMIISLLQPAPETFDLFDDIILLSEGHIIYQGPRENVLNFFESVGFKCPERKGIADFLQEVTSRKDQEQYWFARDKPYRYVSVPEFVAHFNNFGIGQQLSQELKVPYDRAKTHPAALVKDKYGISKLELFKACFAREWLLMKRSAFIYIFKTTQIMIMSLITMTVFFRTEMRSGHLEDGRKYYGALFFSLTNIMFNGMAELSLTIFRLPVFFKQRDSLFFPAWAFAIPIWIFRIPLSFVESGLWVVLTYYTVGYAPAPSRFFRQLLAFFCSHQMGMSLFRFIAALGRTLVVANTFGFFVLLLVYVLGGFIIAKENLEPWMKWGYYISPMMYGQNAIAINEFLDERWSAPNTDHRIPEPTVGKALLRIRSMFTEDYWYWICIGALLGFSLLFNICFIIALTFLNPYGDSKSIILEEENEKKGTTEESFASTDKPFEVKNTRESSTPKAGTATTKRGLVLPFKPLSLAFDHVNYYVDMPTEMEKHGVEGSRLQLLRDVSGAFRPGVLTALVGVTGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQATFARISGYCEQNDIHSPRITVYESILFSAWLRLGKEVKRDIRKMFVEEVMNLVELHPVRDFQVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTADTGRTIVCTIHQPSIDIFEAFDELLLMKRGGQIIYNGPLGQQSQKLIAHFETIPGVPRIKDGYNPATWVLEITTPAVESQLRVDFAEFYTKSELYQRNQELIEELSTPLEGTKDLDFPTKYSLSFITQCIACFWKQHLSYWRNPQYNGIRLFMAVIIGVIFGLIFWKKGNQTDTEQDLMNLMGAIFAAVFFLGGSNTSSVQPIVAIERTVFYRERAAGMYSALPYAIAQVAIECIYVAIQTFSFSLILFSMMGFLWRVDKFLWFYFFMFISFVYFTLYGMMTAALTPNPQIAAIVMAFFLVFWNIFSGFIIPKSQIPIWWRWFYWVCPTAWSLYGLVTSQVGDKDTPILVPGTESMTVKAFLEEEFGYEYGFLGVVAVAHIAFVALFLFVFAYSIKVFNFQKR* 1469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1830 1468 PANTHER ATP-BINDING CASSETTE TRANSPORTER 12 1468 - -
Gso10g1830 1468 SMART AAA_5 904 1096 IPR003593 -
Gso10g1830 1468 SMART AAA_5 204 429 IPR003593 -
Gso10g1830 1468 CDD ABCG_PDR_domain2 864 1102 IPR034003 -
Gso10g1830 1468 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 891 1106 IPR027417 -
Gso10g1830 1468 Pfam ABC-transporter N-terminal 120 169 IPR029481 -
Gso10g1830 1468 Pfam ABC transporter 195 377 IPR003439 GO:0005524
Gso10g1830 1468 Pfam ABC transporter 895 1047 IPR003439 GO:0005524
Gso10g1830 1468 Pfam ABC-2 type transporter 1192 1404 IPR013525 GO:0016020|GO:0140359
Gso10g1830 1468 Pfam ABC-2 type transporter 531 743 IPR013525 GO:0016020|GO:0140359
Gso10g1830 1468 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 12 1468 - -
Gso10g1830 1468 Pfam ABC-2 type transporter 410 461 IPR043926 GO:0140359
Gso10g1830 1468 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 451 IPR027417 -
Gso10g1830 1468 Pfam Plant PDR ABC transporter associated 748 814 IPR013581 -
Gso10g1830 1468 Gene3D - 183 482 IPR027417 -
Gso10g1830 1468 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 867 1120 IPR003439 GO:0005524
Gso10g1830 1468 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 179 452 IPR003439 GO:0005524
Gso10g1830 1468 Gene3D - 881 1115 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1830 Gso-Chr10 44964362 44979639 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1830 K08711 - gmx:100786666 2769.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1514 20 45693683 45707081 Gso10g1830 10 44964362 44979639 GST