Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1826 ATGCATCATCCTCATCCACTTCACTTAATAAACCATCTCATTCCCTCTCTCCCTAAAATGGCCACTCTTCCCTCCTACGACCACCTCATCTTCACTGCCTTAGCTTTCTTCTTATCTGGCCTTATTTTCTTCCTCAAACACAAATCCAAATCCAAATCCAAAAAATTCAACCTCCCTCCAGGACCCCCTGGATGGCCTATTGTTGGAAACCTCTTCCAAGTTGCTCGTTCCGGGAAACCTTTCTTTGAATACGTGAACGATGTGAGACTCAAATATGGCTCAATCTTCACCCTCAAGATGGGGACAAGGACCATGATCATCCTCACCGACTCAAAACTGGTCCACGAGGCCATGATACAAAAGGGTGCAACCTACGCCACCAGGCCTCCAGAGAATCCCACCAGAACCATCTTCAGCGAAAACAAGTTCACCGTGAATGCTGCCACCTATGGCCCCGTGTGGAAGTCTCTCAGGAGGAACATGGTGCAGAACATGCTCAGCTCAACAAGACTTAAGGAGTTTCGCAGCGTTCGCGACAATGCGATGGACAAGCTCATCAACAGGCTCAAGGACGAAGCCGAGAATAATAATGGTGCGGTTTGGGTTCTCAAAGATGCTAGGTTTGCTGTTTTTTGCATACTTGTGGCTATGTGTTTTGGTCTTGAGATGGATGAGGAGACAGTTGAGAGAATCGATCAGGTTATGAAGAGTGTTCTCATCACCTTGGATCCGAGAATTGATGACTATCTTCCAATTCTAAGTCCGTTTTTCTCAAAGCAAAGAAAGAAAGCCTTGGAGGTTCGTAGAGAACAAGTTGAGTTCTTAGTTCCAATTATAGAACAAAGAAGAAGAGCAATCCAAAACCCGGGTTCAGATCACACCGCCACAACGTTTTCCTACCTAGACACACTTTTTGATCTCAAAGTTGAAGGGAAGAAATCAGCACCTTCTGATGCAGAATTGGTTTCACTGTGCTCAGAGTTTCTCAACGGTGGCACAGACACAACAGCAACAGCGGTTGAGTGGGGCATAGCACAGCTCATAGCAAACCCTCACGTTCAGAAAAAGCTCTATGAAGAAATAAAGAGGACGGTGGGAGAGAAGAAAGTGGATGAAAAGGATGTTGAGAAAATGCCATACCTACACGCTGTGGTGAAGGAGCTTCTTAGAAAGCACCCTCCAACACACTTTGTGCTAACACATGCTGTGACTGAACCCACCACTTTGGGTGGTTATGACATACCAATTGATGCAAGTGTTGAGGTGTACACACCAGCCATTGCTGGTGACCCGAAAAATTGGTCAAACCCTGAGAAGTTTGACCCCGAGAGGTTCATCTCTGGGGGTGAGGAAGCAGACATAACCGGGGTAACTGGGGTGAAGATGATGCCTTTTGGTGTTGGGAGAAGGATTTGCCCTGGCTTGGCTATGGCCACAGTGCATATTCACCTCATGATGGCTAGGATGGTGCAGGAGTTTGAGTGGGATGCTTACCCACCAGAGAAGAAGTTGGATTTCACTGGCAAGTGGGAGTTCACTGTGGTCATGAAAGAGTCTCTAAGAGCAACCATCAAACCAAGAGGAGGAGGAGGAGAAAAAGTGCACTTGTAA 1611 0.4674 MHHPHPLHLINHLIPSLPKMATLPSYDHLIFTALAFFLSGLIFFLKHKSKSKSKKFNLPPGPPGWPIVGNLFQVARSGKPFFEYVNDVRLKYGSIFTLKMGTRTMIILTDSKLVHEAMIQKGATYATRPPENPTRTIFSENKFTVNAATYGPVWKSLRRNMVQNMLSSTRLKEFRSVRDNAMDKLINRLKDEAENNNGAVWVLKDARFAVFCILVAMCFGLEMDEETVERIDQVMKSVLITLDPRIDDYLPILSPFFSKQRKKALEVRREQVEFLVPIIEQRRRAIQNPGSDHTATTFSYLDTLFDLKVEGKKSAPSDAELVSLCSEFLNGGTDTTATAVEWGIAQLIANPHVQKKLYEEIKRTVGEKKVDEKDVEKMPYLHAVVKELLRKHPPTHFVLTHAVTEPTTLGGYDIPIDASVEVYTPAIAGDPKNWSNPEKFDPERFISGGEEADITGVTGVKMMPFGVGRRICPGLAMATVHIHLMMARMVQEFEWDAYPPEKKLDFTGKWEFTVVMKESLRATIKPRGGGGEKVHL* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1826 536 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Gso10g1826 536 Gene3D Cytochrome P450 51 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g1826 536 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g1826 536 PRINTS E-class P450 group I signature 113 134 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g1826 536 PRINTS E-class P450 group I signature 209 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g1826 536 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g1826 536 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g1826 536 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g1826 536 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g1826 536 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g1826 536 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g1826 536 SUPERFAMILY Cytochrome P450 59 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g1826 536 PANTHER CYTOCHROME P450 77A4 19 527 - -
Gso10g1826 536 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 19 527 - -
Gso10g1826 536 Pfam Cytochrome P450 59 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g1826 536 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g1826 536 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g1826 536 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso10g1826 536 PRINTS P450 superfamily signature 472 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1826 Gso-Chr10 44925256 44927208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1826 48 527 Cytochrome P450 AT3G10570 71.042 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1826 K21995 - gmx:100793522 1040.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1520 20 45751431 45753478 Gso10g1826 10 44925256 44927208 GST