Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1816 ATGGATATGCCGAAGAACCGCGCCACTCGAGCAACGTCTCTCAGAGACGCCTCCGACTCCTCTAAATTGGAAGGCACCGGTAGCTGGGACGCCATCGAATGGACCAAGATTGAGCCAATTTCCCGGTTCGTCTCGCACGCCAATCTCGATTTCTTACTCGAGTCGGAGCAAGTTGTAGCCGAAGGAAATGGTGTTGTTCTTGTTAATACAGATGATGCGGGCACGCTGATGGTAACAAATTTCCGTCTTATTTTTCTGAGCGAGGGAACTAGAAAAGTTATTGCCCTTGGAACAATACCTTTAACAACCATTGAGAAGTTTAACAAGACAGTTGTGAAGGTTCACTCAAATACTCGCTATGTAGACAAGACACCAGCACAGAGACTGCTCCAGGTGATTGGAAAAGATATGAGAATTTTAGTCTTCAGTTTCAGGCCACGTACAAAACAGAGACGTGTGGTTTACGAAGCGCTACTGAGGTGTACAAAGCCAACAAGACTATGGGATCTTTATGCTTTTGCATCAGGACCTTCTAGATTTAAGAACACTACTCCACTGGTGCGTTTATTGGATGAATATTTTCGACTTCTTTGCCTAGGTTCTTATCGTTCATCAATCAATATAATTGAAAATGGGTCCTTTACCTTGTCAAATGACCTATGGAGAATAAGTAGTGTGAATTGCAATTATACAATGTGCCAGAGTTATCCATTTGCTTTGGTTGTTCCAAAGATCATTAGTGATGATGAAGTGCTCCAGGCTAGTAGCTTCCGTGCAAGATGTCGACTACCTGTAGTTTCATGGTGCCATCCTTTGACTGGAGCAGTTGTTGCACGATCTTCTCAACCCTTAGTAGGTCTTATGATGAACATGAGGAGCAACATGGATGAAAAACTTGTGGCTGCACTTTGCAGCAAACTAGATAATGGTTCTAGGAGAAAGCTGTATATTGTTGATGCACGGCCTAGGAAAAATGCATTGGCTAATGGTGCCATGGGAGGTGGTTCAGAATCATCATCAAACTATTTTCAATCTGAGATAGTCTTTTTGGGGATAGACAACATCCATGCGATGAGAGAGAGCTTTGTTCGGCTCCGAGAATACATGGACACTCATGGCAGAACGTCATCAGATGGAATGTCCTCTTTTTTGAGACAAGGTGGGTCAACGTGGGGTGGTGGCAATCTAAGTAGTATGTCTGCTTCGGTATCAACCCTTGGGGACAGTGGATGGTTACTACATGTTCAGAATGTGTTGGCTGGTGCAGCTTGGATTGCTGCTCGTGTTGCAATGGAAAATGCTTCTGTTCTTGTGCATTGCAGTGATGGATGGGATAGGACAAGCCAGTTGGTTTCACTTGCTAATTTGTTGCTTGATCCATATTATCGGACATTCACAGGGTTTCAGGCACTCATTGATAAAGACTGGCTTGCTTTCGGTCATCCATTTTCTGATCGGGTGGGAATGCCATCTGTCTCTGGAACTGGCAATGTGCCTTTCGAGTTATCTAGGCAGTCTTCAACTAGCAATTTCCCACCATCACCCATGCGCCAGTCATCAGGAACCTTTGCGTTGCAACCTCCAGCTTCATCTCACTCGCATAACTCCAACAACTATTCTCCCATTTTTTTGCAGTGGGTTGATTGTGTTTCACAACTATTGCGGATGTATCCTTTTGCTTTTGAGTTTTCTGCGGCTTTCCTGGTGGACTTCGTAGACTGCATGCTTTCTTGTCGTTTTGGAAACTTCTTATGTAACAGTGAGAAGGAGAGGCAGCAATTCAATGTTTTCGAGGCATGTGGATGTCTGTGGGTATACTTGGCTGATTTGCGGACATCAGAAGGAGGTTCCCATGTGCATCACAATCCTTTTTATGATCCACCAAAGCATAATGGTCCTCTTCTGCCCCCAGCAGCAGCATTAGCCCCTACTTTGTGGCCCCAATTCCACCTTCGTTGGGCATGTCCAGAAGAAGCACAAGCTGGGGAGATTGAAGCACGATGCAGGAAGATAATTATGAAATACGCTGAGATGCAGAAGGCTAAAGAAATGGCAGAAAGGAAAGCTAAAGAAGTTACAAATTCCATGGAGTCGTTGAATGCAGAATTACGATGTGAGAAGCAGCTAAGCAGCTCAACTATGAACATGGCCAAGAGTATGAGCAAAGAAAATATGGCCATAAAGCGTGCAATTCAGTCAATGGGGTGCAAGGTTCATGTCTCTGGTAGTAGTGGTGAATGCACTGTTGACATTGAAAGCAACCCAGACATTCTGTGTTGTTCCTCTAGGAAAGAATCAAATAGTAATGTGCGTGATGACAAAAAGGATATGTCTGTTTCAGTAGTGATTACAGCAGATGATGATGATGATGATGGAAACAACACAATTGGTCGGGTATGTGAAACACTCTGCCCATTTCGCTCTGGAGATGGAGGCTGCAGATGGCCAAATGGTGGCTGTGCTCAACTAGGTAGCCAGTATGTTGGTCTGAAGGCAAATTTTGATGCATTTGACCAACTATCAATTAATGATAGTTATTTCAAGTCTGAGTGA 2553 0.4414 MDMPKNRATRATSLRDASDSSKLEGTGSWDAIEWTKIEPISRFVSHANLDFLLESEQVVAEGNGVVLVNTDDAGTLMVTNFRLIFLSEGTRKVIALGTIPLTTIEKFNKTVVKVHSNTRYVDKTPAQRLLQVIGKDMRILVFSFRPRTKQRRVVYEALLRCTKPTRLWDLYAFASGPSRFKNTTPLVRLLDEYFRLLCLGSYRSSINIIENGSFTLSNDLWRISSVNCNYTMCQSYPFALVVPKIISDDEVLQASSFRARCRLPVVSWCHPLTGAVVARSSQPLVGLMMNMRSNMDEKLVAALCSKLDNGSRRKLYIVDARPRKNALANGAMGGGSESSSNYFQSEIVFLGIDNIHAMRESFVRLREYMDTHGRTSSDGMSSFLRQGGSTWGGGNLSSMSASVSTLGDSGWLLHVQNVLAGAAWIAARVAMENASVLVHCSDGWDRTSQLVSLANLLLDPYYRTFTGFQALIDKDWLAFGHPFSDRVGMPSVSGTGNVPFELSRQSSTSNFPPSPMRQSSGTFALQPPASSHSHNSNNYSPIFLQWVDCVSQLLRMYPFAFEFSAAFLVDFVDCMLSCRFGNFLCNSEKERQQFNVFEACGCLWVYLADLRTSEGGSHVHHNPFYDPPKHNGPLLPPAAALAPTLWPQFHLRWACPEEAQAGEIEARCRKIIMKYAEMQKAKEMAERKAKEVTNSMESLNAELRCEKQLSSSTMNMAKSMSKENMAIKRAIQSMGCKVHVSGSSGECTVDIESNPDILCCSSRKESNSNVRDDKKDMSVSVVITADDDDDDGNNTIGRVCETLCPFRSGDGGCRWPNGGCAQLGSQYVGLKANFDAFDQLSINDSYFKSE* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1816 850 PANTHER PHOSPHATIDYLINOSITOL-3-PHOSPHATASE MYOTUBULARIN-1 19 849 - -
Gso10g1816 850 Coils Coil 675 709 - -
Gso10g1816 850 PANTHER MYOTUBULARIN-RELATED 19 849 IPR030564 -
Gso10g1816 850 MobiDBLite consensus disorder prediction 1 25 - -
Gso10g1816 850 SMART gram2001c 41 111 IPR004182 -
Gso10g1816 850 SUPERFAMILY PH domain-like 52 174 - -
Gso10g1816 850 ProSitePatterns Tyrosine specific protein phosphatases active site. 438 448 IPR016130 GO:0016311|GO:0016791
Gso10g1816 850 MobiDBLite consensus disorder prediction 503 535 - -
Gso10g1816 850 Pfam Myotubularin-like phosphatase domain 171 592 IPR010569 -
Gso10g1816 850 MobiDBLite consensus disorder prediction 11 25 - -
Gso10g1816 850 CDD PTP-MTM-like 261 552 - -
Gso10g1816 850 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 212 654 IPR029021 -
Gso10g1816 850 Gene3D - 63 162 IPR011993 -
Gso10g1816 850 ProSiteProfiles Myotubularin phosphatase domain. 201 650 IPR010569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1816 Gso-Chr10 44790114 44804524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1816 1 848 Protein tyrosine phosphatase (PTP) family AT3G10550 67.292 0.0 1144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1816 K18081 - gmx:100781842 1664.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1530 20 45858793 45872044 Gso10g1816 10 44790114 44804524 GST