LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso10g1810	ATGTTGGAAATGGAGAAGGATTTTGATTCCAAGCTGAAGATTCAGGGGAATTCCTCATCTTCCAATGGTGCTGGGAATGTACAGAGATCCAAAAGCTTTGCTTTTAGGGCACCCCAGGAGAATTACACTATCCAGGACTTTGAATTGGGCAAGATCTATGGTGTTGGCTCTTATTCTAAGGTTGTGAGGGCAAAGAAGAAGGACACTGGAATTGTGTACGCATTGAAGATCATGGACAAAAAATTTATTACCAAAGAGAACAAAACAGCTTATGTGAAGTTGGAACGCATTGTGCTAGATCAATTGGATCATCCAGGCATTGTGCGGTTATATTTCACATTTCAAGACTCATTTTCTCTATACATGGCACTTGAATCCTGTGAAGGTGGAGAACTTTTTGATCAAATAACCAGGAAAGGTCGTCTATCAGAGAATGAGGCACGATTCTATGCAGCTGAAGTTATCGATGCTCTTGAATACATACATAATTTGGGAGTCATACATCGTGATATTAAGCCAGAGAACTTATTACTTACCGCTGAAGGACATATTAAAATAGCCGATTTTGGGAGTGTGAAGCCTATGCAGGATAGCCAAATAACTGTCCTTCCAAATGCAGCATCAGATGACAAAGCCTGCACTTTTGTGGGAACAGCTGCTTATGTTCCTCCAGAGGTTCTTAATTCCTCTCCAGCAACTTTTGGAAATGACCTTTGGGCACTTGGCTGCACATTATACCAAATGCTTTCTGGAACTTCCCCTTTTAAAGACGCAAGTGAATGGCTTATTTTTCAAAGAATTATAGCAAGAGAACTTAGATTTCCAGATTACTTTTCTGACGAAGCAAGAGACCTTATTGACCGCCTGTTGGATTTGGACCCCAGCAGGAGACCAGGTGCTGGACCTGATGGTTATGCTATTTTAAAAAGTCACCCATTTTTCAAGGGGGTTGACTGGGATAACTTGAGGGCACAAATTCCTCCAAAACTTGCTCCAGAACCTGGGACTCAGTCGCCTGCGTCTGATGATGTTCATGACTCATCGTGGAGTCCTTCTCACATTGGGGATGGTTCTGCAGCTTCGGTTAGACAACCTGACGGTGCTACATCTTCTGAGGGGACTGGTCACATAACTAGGCTAGCTTCAATTGATTCCTTCGATTCAAAATGGCAGCAATTTTTGGAACCTGGGGAATCTGTTCTTATGATCTCTATGGTGAAGAAATTACAAAAACTAACAAGCAAGAAGGTGCAACTCATCCTTACCAACAAACCAAAGCTGATCTATGTAGACCCATCAAAGCTAATTGTGAAGGGAAATATAATATGGTCTGATAATCCAAATGATTTAAGCATCCAAGTGGCTAGTCCATCAAATTTCAAGATTTGCACACCTAAAAAGGTAATGTCGTTTGAGGACGCAAAGCAAAGAGCATGGCAGTGGAAAAAGGCAATTGAAGGACTTCAAAACCGGTGA	1476	0.4173	MLEMEKDFDSKLKIQGNSSSSNGAGNVQRSKSFAFRAPQENYTIQDFELGKIYGVGSYSKVVRAKKKDTGIVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLYFTFQDSFSLYMALESCEGGELFDQITRKGRLSENEARFYAAEVIDALEYIHNLGVIHRDIKPENLLLTAEGHIKIADFGSVKPMQDSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARELRFPDYFSDEARDLIDRLLDLDPSRRPGAGPDGYAILKSHPFFKGVDWDNLRAQIPPKLAPEPGTQSPASDDVHDSSWSPSHIGDGSAASVRQPDGATSSEGTGHITRLASIDSFDSKWQQFLEPGESVLMISMVKKLQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPNDLSIQVASPSNFKICTPKKVMSFEDAKQRAWQWKKAIEGLQNR*	492

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso10g1810	491	MobiDBLite	consensus disorder prediction	13	27	-	-
	Gso10g1810	491	Gene3D	Transferase(Phosphotransferase) domain 1	131	333	-	-
	Gso10g1810	491	SUPERFAMILY	Protein kinase-like (PK-like)	44	354	IPR011009	-
	Gso10g1810	491	PANTHER	SERINE/THREONINE-PROTEIN KINASE	21	487	-	-
	Gso10g1810	491	MobiDBLite	consensus disorder prediction	1	27	-	-
	Gso10g1810	491	PANTHER	3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1	21	487	-	-
	Gso10g1810	491	SMART	serkin_6	47	314	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso10g1810	491	Gene3D	Phosphorylase Kinase; domain 1	45	130	-	-
	Gso10g1810	491	SUPERFAMILY	PH domain-like	308	490	-	-
	Gso10g1810	491	MobiDBLite	consensus disorder prediction	340	375	-	-
	Gso10g1810	491	Coils	Coil	471	491	-	-
	Gso10g1810	491	Pfam	Protein kinase domain	49	313	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso10g1810	491	Gene3D	-	369	491	IPR011993	-
	Gso10g1810	491	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	166	178	IPR008271	GO:0004672\|GO:0006468
	Gso10g1810	491	CDD	STKc_PDK1	45	314	IPR039046	GO:0004674
	Gso10g1810	491	MobiDBLite	consensus disorder prediction	326	375	-	-
	Gso10g1810	491	ProSiteProfiles	Protein kinase domain profile.	47	314	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gso10g1810	491	Pfam	PH domain	388	490	IPR033931	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso10g1810	Gso-Chr10	44683728	44691233	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso10g1810	1	491	AGC Kinase Gene Family	AT3G10540	82.927	0.0	838

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_PDK1	Gso10g1810		Pkinase	1e-65	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso10g1810	K06276		-	gmx:100788780	959.133