Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1789 ATGGCTTTCCCTTTCCCAATCCTTTTCCTTCTCTTCCTTTCCCTCACCCCCTCCTTCTCCTCCGCAACGCTCAACGTCGATTACTACAAAAAATCATGTCCACTCTTCGAAAAAATCGTTATGGAAAACGTCTTCCACAAACAAAGCACAAGCGTGGCCACAGCACCGGGTCTCCTACGTCTCTTCTTCCATGATTGCATCACCGATGGCTGCGACGCTTCGATCCTCATCACTTCCAACTCATACAACCCTCATGCAGAACGTGATGCAGACCTCAATCTTTCTCTGGCAGGTGATGCCTTTGACATCATATTTAGAATAAAAAACGCATTGGAACTTGCATGCCCCGGTGTGGTGTCGTGTTCCGACATCGTGGCACAGGCAACAAGAGACCTTGTTAAGATGGTTGGTGGTCCTTATTACCCTGTGAGATTGGGGAGAAAGGATAGCACTGAATCAGTTGCTGCAAGAGTGAGTGCTAGCCTTCCAACACCAGACATGACCATGGACCAGTTGCTTGAGAAGTTCACCTCAAAGGGTTTCACTGTTAAGGAAATGGTGGCTTTGAGTGGGGCACACACCATTGGTTTCGCACACTGCAAGGAGTTCATAAACAGGATCTACAACTTCAGCAAAACCTCTGATGCTGACCCTTTGATGCACCCTAAGCTGGTTAAAGGGTTGAGGGTTGTGTGCCAAAACTTCACCAAGGACATCTCAATGGCTGCATTCAATGATGTTAGGTCACCAGGGAAGTTTGACAATGTTTATTACCAAAATGTCATGAAGGGCTTGGGGTTATTGACCTCTGACTCCATTCTTGCTGTTGACCCAAGGACAAAACCTATTGTGGAGCTCTATGCTAATGATCAGCAAGCTTTCTTCAAGGACTTTGCTGCTGCCATGGAGAAGCTCTCTGTGTTTAGAGTGAAAACTGGCAACAAAGGAGAGGTCAGGAACAGGTGTGACCAGTTCAACCATATTCCCGTCTAA 993 0.4693 MAFPFPILFLLFLSLTPSFSSATLNVDYYKKSCPLFEKIVMENVFHKQSTSVATAPGLLRLFFHDCITDGCDASILITSNSYNPHAERDADLNLSLAGDAFDIIFRIKNALELACPGVVSCSDIVAQATRDLVKMVGGPYYPVRLGRKDSTESVAARVSASLPTPDMTMDQLLEKFTSKGFTVKEMVALSGAHTIGFAHCKEFINRIYNFSKTSDADPLMHPKLVKGLRVVCQNFTKDISMAAFNDVRSPGKFDNVYYQNVMKGLGLLTSDSILAVDPRTKPIVELYANDQQAFFKDFAAAMEKLSVFRVKTGNKGEVRNRCDQFNHIPV* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1789 330 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Gso10g1789 330 Gene3D - 27 326 - -
Gso10g1789 330 PANTHER - 4 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1789 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Gso10g1789 330 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g1789 330 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g1789 330 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g1789 330 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g1789 330 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g1789 330 Pfam Peroxidase 51 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g1789 330 Gene3D Peroxidase, domain 2 163 305 - -
Gso10g1789 330 ProSiteProfiles Plant heme peroxidase family profile. 23 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso10g1789 330 PANTHER PEROXIDASE 41 4 329 - -
Gso10g1789 330 SUPERFAMILY Heme-dependent peroxidases 24 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso10g1789 330 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1789 330 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1789 330 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1789 330 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1789 330 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1789 330 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1789 330 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1789 330 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1789 330 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso10g1789 330 CDD secretory_peroxidase 24 325 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1789 Gso-Chr10 44484401 44485987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1789 4 330 Peroxidase AT5G47000 57.143 2.82e-128 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1789 K00430 - gmx:100776496 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1551 20 46149493 46150996 Gso10g1789 10 44484401 44485987 GST