Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1786 ATGTCAGGTGAGGAAATCTTGTCATCCAATGAAGAAAAATATAATAGATCTCAACCTCCATTTGGTAGCAGGAGTGGCTACAATTCAAGAACAGGCATTTATCACTCTCTAATTAAGCTTGGCATCAAGCATGAAATCCCAACAAGGCCTGATCTTAACACTGCCAATTTTGTGCTGTCACAGTTTCCACAAGCACACCTTGCTGAGGCAAGAATTGCATTCATTGATGCGAGAACTAATCTGAGTGTTAGCTATGGTGAGCTAAGACGGTCTATTTACTCCCTTGCATCAGCTTTGTTCCATGGACTTGAGGTTAGGAAAGGTGATGTGGTATTTGTATTGTCACCAAACTCAACCCTGTACTCAACCATATGCCTAGCTGTGTTATCAGTTGGAGCAGTTCTGACCACTGCCAACCCCATCAACACCGCAACGGAAATCGCGAAACAAGTGCACGATTCGAGTGCTAAACTAGCCATCTCAGCACCTGAGGAGCTACACAAGTTGGTCCCAACTGGGGTTCCTACCATTCTCACTTCTCATTGTTCTGATGGCAACATGTTATCAGTTGAAGAGTTAATAAAAGGCTGTTGTACTTCACCAGAGTTGCCTCAAGTTCCCGTGGCACAATCAGACACTGCTGCTATACTTTACTCTTCAGGAACCACAGGGGTAAGCAAAGGTGTGGTTCTGACACATGCAAATCTCATTTCCATAATGAGACTACTCTTGTGGTCTGCAGATGTAAGTGGGTCCCAAGATGATGTTTTCTTGGCCTTCATTCCAATGTTTCACATCTATGGACTTGTGTTCTTTGGATTAGGATTGTTGTGTGTTGGTGTTACAACAATTTTGATGCAGAAATATGACTTCCAAGCTATGCTTGATGCCATCCAGAAGCACAAGGTGAATAACTTACCAGCAGTGCCACCAGTGATCCTTGCACTAGTAAAACATGCAAGGAAAGCTAGGTGTGACTTATCCAGCCTAAGAAGGGTGGGGTCAGGTGCTGCACCTTTGAGCAAGGAAGTGGCACTAGAGTTTAGAAGGATGTTTCCATGGATTGAACTGAGGCAAGGTTATGGCCTAACAGAAAGTAGTGGTGGAGCAACATTTTTTGCCTCAGATAAAGATGCTAAAGCTCATCCAGATTCATGTGGGAAGTTGATTCCAACTTTTTGTGCAAAAGTTGTAGATATTGAAAAGGGGAAGCCTTTGCCTCCTCACAAAGAGGGAGAATTATGGTTCAAAAGTCCTACCATTATGAAAGGATATCTAGGAAATTTGGAGGCAACAAGTGCAGCAATTGATTCAGAAGGTTGGTTGAGGACTGGTGATCTTGGTTACATTGATGAGAATGGATTTGTTTATATAGTCGAACGAATAAAGGAGCTAATCAAGCACAATGGTTATCAGGTGGCTCCTGCAGAATTGGAATCTGTGCTGCTAAGTCACCCCCTTATAGTTGACGCAGCAGTTATACCGGTTGAAGATGAAGAAACTGGACAGATACCAATGGCATATGTGGTGAGAGCAGCTGGTTCTGAACTCTCAGAAAACCAAGTCATTCAATTTGTTGCAGGCCAGGTGGCTCCATATAAGAAAGTGAGAAAGGTGAGTTTCATTGACACTATTCCAAAGTCAGCTGCTGGCAAGATATTGCGGAAGGATCTTGTTTCTCAAAGCAAATATCAACTTGTCTCCAAGTTATGA 1713 0.4302 MSGEEILSSNEEKYNRSQPPFGSRSGYNSRTGIYHSLIKLGIKHEIPTRPDLNTANFVLSQFPQAHLAEARIAFIDARTNLSVSYGELRRSIYSLASALFHGLEVRKGDVVFVLSPNSTLYSTICLAVLSVGAVLTTANPINTATEIAKQVHDSSAKLAISAPEELHKLVPTGVPTILTSHCSDGNMLSVEELIKGCCTSPELPQVPVAQSDTAAILYSSGTTGVSKGVVLTHANLISIMRLLLWSADVSGSQDDVFLAFIPMFHIYGLVFFGLGLLCVGVTTILMQKYDFQAMLDAIQKHKVNNLPAVPPVILALVKHARKARCDLSSLRRVGSGAAPLSKEVALEFRRMFPWIELRQGYGLTESSGGATFFASDKDAKAHPDSCGKLIPTFCAKVVDIEKGKPLPPHKEGELWFKSPTIMKGYLGNLEATSAAIDSEGWLRTGDLGYIDENGFVYIVERIKELIKHNGYQVAPAELESVLLSHPLIVDAAVIPVEDEETGQIPMAYVVRAAGSELSENQVIQFVAGQVAPYKKVRKVSFIDTIPKSAAGKILRKDLVSQSKYQLVSKL* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1786 570 SUPERFAMILY Acetyl-CoA synthetase-like 64 561 - -
Gso10g1786 570 ProSitePatterns Putative AMP-binding domain signature. 216 227 IPR020845 -
Gso10g1786 570 CDD 4CL 46 558 - -
Gso10g1786 570 MobiDBLite consensus disorder prediction 1 27 - -
Gso10g1786 570 Gene3D - 43 463 IPR042099 -
Gso10g1786 570 Gene3D - 464 566 IPR045851 -
Gso10g1786 570 PANTHER AMP-DEPENDENT SYNTHETASE AND LIGASE FAMILY PROTEIN-RELATED 19 569 - -
Gso10g1786 570 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 19 569 - -
Gso10g1786 570 Pfam AMP-binding enzyme C-terminal domain 477 552 IPR025110 -
Gso10g1786 570 Pfam AMP-binding enzyme 69 467 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1786 Gso-Chr10 44467697 44470236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1786 59 566 Monolignol Biosynthesis Gene Families AT1G20500 44.595 2.22e-152 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1786 K10526 - gmx:100783104 1102.04