Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1775 ATGCAAAAAAGAAGAGAAGAAAGTGACAAAATCCCAGTAAAGCGTGACAGTGCCAGCTCCCTACCTCAACCCCAAAGTCTTGTGCTTTTCACATCCCCATTTTCCCCATTCCCCTTTCTGCTTCCTCTTTCTTTCGCCAAATGGGTCATCATCTCCTTCTCCCATAACACAATCTTCTTCACCTTTTCTTTCTTCTTCGCTTCCCTTCGGTGGGGTTTCAAGTTTCACCATAGGAATAGGATGTTTTCTAGGTTGATTCATCCCCATGAAGGCCAGGAAGACATGCAGGGTGGTTCCAACCACGCTCACCTCGGAGACCCTTGTCTTGTTCTCACCTCTGATCCCAAACCTCGTCTTCGTTGGACCGCTGACCTTCACGAACGCTTTGTTGATGCTGTCACTCAACTTGGGGGTGCCAGTAAAGCCACTCCAAAAGCGATAATGAGGACCATGAATGTCAAGGGTTTGACGCTCTATCATTTGAAGAGTCATCTTCAGAAGTACAGGCTTGGTAAGCAATCAGGAAAAGATTCTGATGAGGGACTCAAAGATGGAATGTCAGCTTCATATCTTCAAGAAAGCCCTGGTACTGATAACTCTTCTCCAAAGTTACCAGCTTCTGATGCTAACGAGGGTCATGAAGTCAAGGAGGCATTAAGAGCTCAGATGGAAGTGCAAAGTAAACTACACTTACTAGTGGAGGCAGAGAAACACTTGCAGATTCGCCAGGATGCAGAGCGGAGATACATGGGCATGCTTGAGCGAGCGTGTAAGATGTTGGCAGATCAATTTATTGGGGATGTAATTATCGACAGGGATGGCCAAAAATTTCAAGGACTGGAAAACAAAACATCAAGAAGTCCCCTAGTTGATCATGGAGGCTTTTTTCCCGCAGCGTGTACTGAGGTGGGTGGAATGCATGTTTCAGAAGTACCACCCATTCTCCAGCCTCAAGGGGCTGAGTGCTCCAGTGAAAGTTGCCTAAAATCACTTGAGAGTCTGGGAGGGTTGACACTAGAAGGATCTCCCGGCGGATCAAAGAAGAGGATGCTGAACTTGGACTCAATGGTAGCACCTTTGATCTGGAGCGAAGCCAACACCAGAACTCAAGGAATCCATTTAGCCCAAGTTAATCCTCCAGGAATGACTAGGTATGGCATGTAG 1164 0.4682 MQKRREESDKIPVKRDSASSLPQPQSLVLFTSPFSPFPFLLPLSFAKWVIISFSHNTIFFTFSFFFASLRWGFKFHHRNRMFSRLIHPHEGQEDMQGGSNHAHLGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQSGKDSDEGLKDGMSASYLQESPGTDNSSPKLPASDANEGHEVKEALRAQMEVQSKLHLLVEAEKHLQIRQDAERRYMGMLERACKMLADQFIGDVIIDRDGQKFQGLENKTSRSPLVDHGGFFPAACTEVGGMHVSEVPPILQPQGAECSSESCLKSLESLGGLTLEGSPGGSKKRMLNLDSMVAPLIWSEANTRTQGIHLAQVNPPGMTRYGM* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1775 387 Pfam Myb-like DNA-binding domain 119 169 IPR001005 -
Gso10g1775 387 MobiDBLite consensus disorder prediction 170 213 - -
Gso10g1775 387 Gene3D - 115 173 - -
Gso10g1775 387 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 61 387 IPR044848 GO:0003700
Gso10g1775 387 Pfam MYB-CC type transfactor, LHEQLE motif 214 259 IPR025756 -
Gso10g1775 387 SUPERFAMILY Homeodomain-like 116 172 IPR009057 -
Gso10g1775 387 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 116 171 IPR006447 GO:0003677
Gso10g1775 387 MobiDBLite consensus disorder prediction 190 206 - -
Gso10g1775 387 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 61 387 - -
Gso10g1775 387 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 113 173 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1775 Gso-Chr10 44357250 44360659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1775 97 263 G2-like Transcription Factor Family AT3G24120 56.497 1.75e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso10g1775 Myb_DNA-binding 1.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1775 - - gsj:114401232 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1568 20 46298842 46302287 Gso10g1775 10 44357250 44360659 GST