Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1764 ATGAATAGTTCAGAGGAAACCGCGCTATTGCTTGTGAGCTTTATTGTTCTAACCCTTATAATTACACTCACAGCATATGTGTGCTCTAATAACATTCCACGCACTGTTCCATCTGTGCCTGGTGGTGCCACACACTCCAACAACAACCACACTACAATCACTGTGGAGCCACCCGAGCCACGCTTAGATCACACCAATGTACGAAGCTATCCAAGTCTTCAATTCTCCAAAGCTAAATTGTGTAGTAGCAATAGTAGTAGTAGTAGCTCTTCAAGTTGTTCCATATGCTTGATGGATTACAAAGATTGTGATTCCTTGAAAGTGCTTCCTGCTTGTGGTCATTTCTTCCATGTCAAGTGTGTTGATCCTTGGTTGAGAATCAGTTTGACATGCCCGGTTTGTAGGACCCCAATAGCACTCCCAGATATATGTAAAAATTTGGAATGA 447 0.4228 MNSSEETALLLVSFIVLTLIITLTAYVCSNNIPRTVPSVPGGATHSNNNHTTITVEPPEPRLDHTNVRSYPSLQFSKAKLCSSNSSSSSSSSCSICLMDYKDCDSLKVLPACGHFFHVKCVDPWLRISLTCPVCRTPIALPDICKNLE* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1764 148 PANTHER RING-H2 FINGER PROTEIN ATL67 9 147 IPR044289 GO:0016567|GO:0016740
Gso10g1764 148 SUPERFAMILY RING/U-box 92 141 - -
Gso10g1764 148 SMART ring_2 93 134 IPR001841 -
Gso10g1764 148 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 9 147 - -
Gso10g1764 148 Pfam Ring finger domain 92 135 IPR001841 -
Gso10g1764 148 MobiDBLite consensus disorder prediction 39 55 - -
Gso10g1764 148 ProSiteProfiles Zinc finger RING-type profile. 93 135 IPR001841 -
Gso10g1764 148 MobiDBLite consensus disorder prediction 39 61 - -
Gso10g1764 148 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 46 140 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1764 Gso-Chr10 44268264 44268710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1764 12 136 C3H Transcription Factor Family AT5G06490 34.266 5.97e-22 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1764 - - gmx:102663850 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1578 20 46395586 46396026 Gso10g1764 10 44268264 44268710 GST