Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1740 ATGAGCAATGAGGATCCTGGCATTTCAGGCAAGCAATATATAGATACGGTGAGTGTTGGTTTAAGCGACAGAATCTCTTCTGATGATGATTCAGACAATATATGTCTACAGACGGGTGAAGAATTTTCTGCCGAGTTCTTACGTGATCGGGTTGCCTTAAGGAGATTTCCTGTCGTTACTAATGCAGACCAGCATATGCCAAACAGGTTGGACTTTAATATTAAAGAAAATAATTATCAACTGGTTTATGAGGATCTAAAGCATGTTCTTGGGCTAAGGAGAACAGAATCTGATAGTAACTCAGATTTGTCTGAGATTGCTTCAGTCAGAGGATATGCTGTTGAAGTTGACGGCAGGGCTTATCCTAATAATTTGAGCAGATACCAGTGTGAACACGGCGGTTTCAGACAAGCATCAGGTAAATTTTCTAGACAACTATCCGGTAAATTTTCCGAGGGAAATGGTTGTGATCAAGTTAATTCGGGACCAAATGCTCCATCTGTTTATGTCGTTGAGTCTCCTCATTGCCATCCTTATGGATCAGTATTCTCAGAAGGTTCTTTCTATAAGAAGATAAAGTTTCTGTGTAGCTTTGGAGGTAGAATACTACCAAGACCAAATGACGGGAAGCTCAGATATGTGGGTGGAGAGACACGGATAATATCCATCAGGAAGAACATCACATGGGAGGAACTTATGAGGAAGACTTCTGCTATTTGCAGTCAAACTCACATTATCAAGTACCAGCTTCCTGGAGAAGATCTTGATGCTCTTATATCTGTTTGTTCCAATGAGGATCTTCATCATATGATTGAGGAGTGTGAAGAGCTTGAAAGAGCTGGAGGCTCTCAACGGCTTAGGAATTTTCTCATACCTTCAAATGAATGCGAGAGTCCAAGTTCCAATGAAGCAAGAGTCAATCAGCCAAGTGATGCAGATTATCATTATGTTGTTGCTGTTAATGGTTTGCTGGATCCAAGTCCAAGGAAGAATTCCAATGGGCTGAGTTTGGCAAGCCATGCCAATCAGTTTGGAAATACCTCTGATTACAACAGTCCACATTTCTATAGAGACTCATCCACATCTGCATTTGCTTCAGAGATGAAGGATTGCACCCCAAATTCTCCAAATTTGGTAGGCATACTCTCAAAACCTGGTACTCAATTCTTTCCAGTCCTAGCAGGCAAGTCATTCAGTCAAATGTCTCCTTTATCTCCCACTTGTGTACAGCCTAAAGATCCCAAAATTTCTAATGTACAGCTATTTAAGGATAAACCATATCATGCTATTAATGAAAGCATTACTCCCTTTGTTATGGAAAAAGTTCCATGCAACAATTCTTTGTTTGTAGAAAATGCCAATTATGTTGATCCAGTTGCACACCATAACAATCTTGCTCAAGGGCCTACATGTGTGAATTACCATCCTAATAACCAATATATAGTGGAGCCTGACCTGATCAGGAAGCCTGGTGAGAATCTTCACCTTCACAGACGGAACAACAGTAGCAATGAGTTTGTCTCTTCTGCGGCATGTAGTCTAACTGATATGATCTTCGAGAGACCTTTAGTCAACAATGAAGGTTCATACCATTTTAACAAGGTTGTCTCTCGTCCTCATGAGTCATCGAGTTTATTCTCAGATTCTGATGTTAGAGAGGGATCTTGGTACAGAATGTTGCATGCGCATTCTGACTCAACTCTTAAGGAGAATGATGAGAACTATAAAGTTCACTTGCAATTTCCCCTCAGTGTAGAGAGAGACAATTTGCCATCACTGAAAAATTCAAGTTCTTTAGAAGAATGTTCGATACAGCCTGGAGAGATGATCGATAGGAAAGAACACCTGGCAAAGTATCAAAATTTGCCCATTTTTGGAAAGACTGATAGTTTTAATGTGTCAGAAATTGGTAAAGATATCTTGCAACTTGCAGATAAAAGCAATGATTTTTTTGATGAAAATGCTGGAGCTATGTCACAAGACAATGCCATAGATTTAAAACATTTACAGTACATTTATAGCTCACATGGTGTTTGCTCATCTTCACCAGATTTCCAAAGCAGTGAATGCAATTTATCTACTGCATCATTTATCTCTTTAGAATCCACAAGAAACCTGAGGGGGAAACCATTAGACAGAACTGCTTCTGAGTTTTCCAGGAGGAGCCAATACTCATCGATGGTTCACCAATATGCTATGCCGGAGACAAAAGACGGTCAACCACTTCTTCCTTGCTCTTTTGAGTCCCAAACTGACAGAGGGTCCATACTACCTATCTCATATATGGACATGTGTTCTTCCTTAAGAGAGGTTGTTATCCCTGTTGAAGATCCTGCATACTACCTGCACCAAAAGGAACATAACACAGTCATTAAGAATCAGTGTTCTGAGTATATCAATGAATTTTGTGTCCACAAGCCTGTGGCAGAACCAGTGGCTGTTGTCAAGGGACCAAGGGATTATAATTCTTCAGGTATCCAGTCGTGCTTAAAAGTTGTCTCAAATGTAGATGAAGAGGCTGATGTTGAACCTACATCTCCTGAAAAGGAAGGGATAGAATGTGATAATCCAGAATCTGAAAGTAAGCATGCAGAATCTGATAGTGGAAACTTCAATAAGCCTAATGGTGATAGAGCAACTGCTGAAACTGAGGCTGAAATTTATGGTTTACAGAATATTGAGAATGATGATCTTGAAGAATTGCAAGAGTTAGGATCTGGAACATTTGGAACTGTTTATCACGGAAAGTGGAGGGGAACAGATGTTGCAATTAAGAGAATAAAAAGTAGCTGTTTCTCTGGTAGATTGTCGGAGCAAGAGCGGTTGACTAAAGATTTTTGGAGAGAGGCACAGATTCTGTCAACTCTTCACCATCCAAATGTGGTGGCATTTTATGGGGTAGTTCCAGATGACCCAGGTGGAACATTGGCAACAGTAACCGAATACATGTTGCATGGATCACTGAGGAATGTTCTCATGAAGAAGGATAAAGTGCTTGACCGCCGGAAAAGGCTCCTGATTGCAATTGATGCAGCCTTTGGGATGGAATATTTGCATTTGAAAAATATTGTTCATTTTGATTTGAAGTGTGATAATTTACTTGTCAATCTGGGCGATCCTGAGCGACCTGTATGTAAGGTTGGAGATTTTGGCCTATCCAGAATTAAACGCAACACACTTGTTTCCGGTGGTGTCAGAGGAACCCTTCCATGGATGGCGCCTGAATTACTAGATGGTAACAGTTGTAGGGTATCTGAGAAGGTTGATATTTTCTCATTTGGCATTGCAATGTGGGAAATGTTGACAGGGGAAGAACCATATGCTAACATGCACTGCGGGGCTATCATAGGTGGTATTGTCAATAATACGCTCAGGCCTCCGATTCCAAAACGATGTGATTCCGAGTGGAAAAAGCTGATGGAAGAGTGCTGGAGTCCTGATCCTGCAGCCAGGCCAACCTTCACAGATATTAAAAATAGACTTCGCAACATGTCAGATTCAGTGCCCAAAAAGAGACATAACATTGCTAGACGATGA 3537 0.4071 MSNEDPGISGKQYIDTVSVGLSDRISSDDDSDNICLQTGEEFSAEFLRDRVALRRFPVVTNADQHMPNRLDFNIKENNYQLVYEDLKHVLGLRRTESDSNSDLSEIASVRGYAVEVDGRAYPNNLSRYQCEHGGFRQASGKFSRQLSGKFSEGNGCDQVNSGPNAPSVYVVESPHCHPYGSVFSEGSFYKKIKFLCSFGGRILPRPNDGKLRYVGGETRIISIRKNITWEELMRKTSAICSQTHIIKYQLPGEDLDALISVCSNEDLHHMIEECEELERAGGSQRLRNFLIPSNECESPSSNEARVNQPSDADYHYVVAVNGLLDPSPRKNSNGLSLASHANQFGNTSDYNSPHFYRDSSTSAFASEMKDCTPNSPNLVGILSKPGTQFFPVLAGKSFSQMSPLSPTCVQPKDPKISNVQLFKDKPYHAINESITPFVMEKVPCNNSLFVENANYVDPVAHHNNLAQGPTCVNYHPNNQYIVEPDLIRKPGENLHLHRRNNSSNEFVSSAACSLTDMIFERPLVNNEGSYHFNKVVSRPHESSSLFSDSDVREGSWYRMLHAHSDSTLKENDENYKVHLQFPLSVERDNLPSLKNSSSLEECSIQPGEMIDRKEHLAKYQNLPIFGKTDSFNVSEIGKDILQLADKSNDFFDENAGAMSQDNAIDLKHLQYIYSSHGVCSSSPDFQSSECNLSTASFISLESTRNLRGKPLDRTASEFSRRSQYSSMVHQYAMPETKDGQPLLPCSFESQTDRGSILPISYMDMCSSLREVVIPVEDPAYYLHQKEHNTVIKNQCSEYINEFCVHKPVAEPVAVVKGPRDYNSSGIQSCLKVVSNVDEEADVEPTSPEKEGIECDNPESESKHAESDSGNFNKPNGDRATAETEAEIYGLQNIENDDLEELQELGSGTFGTVYHGKWRGTDVAIKRIKSSCFSGRLSEQERLTKDFWREAQILSTLHHPNVVAFYGVVPDDPGGTLATVTEYMLHGSLRNVLMKKDKVLDRRKRLLIAIDAAFGMEYLHLKNIVHFDLKCDNLLVNLGDPERPVCKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLDGNSCRVSEKVDIFSFGIAMWEMLTGEEPYANMHCGAIIGGIVNNTLRPPIPKRCDSEWKKLMEECWSPDPAARPTFTDIKNRLRNMSDSVPKKRHNIARR* 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1740 1178 Gene3D Phosphorylase Kinase; domain 1 891 985 - -
Gso10g1740 1178 SMART PB1_new 206 293 IPR000270 GO:0005515
Gso10g1740 1178 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1023 1035 IPR008271 GO:0004672|GO:0006468
Gso10g1740 1178 MobiDBLite consensus disorder prediction 845 867 - -
Gso10g1740 1178 Gene3D - 210 292 - -
Gso10g1740 1178 Pfam Protein tyrosine and serine/threonine kinase 900 1161 IPR001245 GO:0004672|GO:0006468
Gso10g1740 1178 PRINTS Tyrosine kinase catalytic domain signature 980 993 IPR001245 GO:0004672|GO:0006468
Gso10g1740 1178 PRINTS Tyrosine kinase catalytic domain signature 1017 1035 IPR001245 GO:0004672|GO:0006468
Gso10g1740 1178 PRINTS Tyrosine kinase catalytic domain signature 1088 1110 IPR001245 GO:0004672|GO:0006468
Gso10g1740 1178 PRINTS Tyrosine kinase catalytic domain signature 1132 1154 IPR001245 GO:0004672|GO:0006468
Gso10g1740 1178 PANTHER SERINE-THREONINE PROTEIN KINASE 120 1176 - -
Gso10g1740 1178 CDD STKc_MAP3K-like 904 1161 - -
Gso10g1740 1178 SUPERFAMILY CAD & PB1 domains 207 300 - -
Gso10g1740 1178 ProSitePatterns Protein kinases ATP-binding region signature. 904 925 IPR017441 GO:0005524
Gso10g1740 1178 Gene3D Transferase(Phosphotransferase) domain 1 986 1177 - -
Gso10g1740 1178 MobiDBLite consensus disorder prediction 837 879 - -
Gso10g1740 1178 Pfam PB1 domain 207 290 IPR000270 GO:0005515
Gso10g1740 1178 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 120 1176 - -
Gso10g1740 1178 SUPERFAMILY Protein kinase-like (PK-like) 888 1161 IPR011009 -
Gso10g1740 1178 SMART serkin_6 898 1168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1740 1178 CDD PB1_UP2 195 291 - -
Gso10g1740 1178 ProSiteProfiles Protein kinase domain profile. 898 1176 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1740 Gso-Chr10 44060148 44067480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1740 35 342 MAP Kinase Kinase Kinase AT1G16270 38.462 3.67e-43 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Gso10g1740 PK_Tyr_Ser-Thr 1.6e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1740 - - gmx:100810711 2387.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1602 20 46576144 46587147 Gso10g1740 10 44060148 44067480 GST