Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1716 ATGTTGCAGGATGTTTTTGATCAGCCACTGCCACCAAAGGCCGAACCACAACAGCAACATCCCATTTGGCTGCAGGATGAAATTTCAAGCCCTCTTAGTGCTCGAATTTTCGAACTTTGTAACACTGATTTTTTCCCAGAGACTTTGCCAAATTCTGAGGTTACTTCCAGCTCAAACTGTTGTTATGAGGAGAACTCCTCATATGCCACAACAAATATATCTGTAACTGTAGATGTAGACAATAAGTTGAATAGCAATAGCAACACAGTCACCACCCCAACTAGCACTACCACCACCAACACCAACAACAACACAACCAACAGTAGTAACCTGTCTATTATCTTTGACTCCCAAGAAGAAATTGACAATGACATCTCTGCCTCCATAGACTTCTCACTATCTCCATCTTTCAATGTTCCCCCATTTCTCCCAGCCACATCCCAGCAAGAACAGTTTGATTTCTCTTCTGTGCAGCATCAGGTCCAACTAGCAGCATGTTCAGTTGTGGAGGGCTTCTCTCAGTATCCCAATGACTCTGTTGCACCTCCTTTTATGGGGGCTCCATTACCTTCTGTTTTTGAAGAGGACTGCATATCTTCTGTCCCTTCTTATATGGCTCTTAACCCCTCATCTCCTTGCACTTATCTCAGTCCTGGCATGCCACCATACATGCCTCATGGCCCCCTTACTACTGCCTTATCAACTGGTAGTTCTGGAATATTTGGTGGGAACATTCTTCTTGGTTCTGAACTTCAGGCACAAGAATTGGAATACCAAGGAGAAAATGGAAGAATGTATTGTACAGATTCAATTCAGCGGGTGTTTAACCCTCCAGACCTTCAGGCTCTTGGCACTGAGAGTCAGCAACTAGTACCAGGGGCTGGAAGTTCTGCCAGTCTACCAGAAATCTCAAACTTAGAGGACTCCTCCTTCAAGGTTGGAAAACTTTCTGTTGAGCAAAGGAAAGAAAAGATCAATAGATACATGAAGAAAAGAAATGAAAGAAACTTCAGCAAGAAAATTAAGTATGCCTGCCGCAAAACTCTGGCAGATAGCCGACCTCGAGTCAGAGGAAGGTTTGCAAAGAATGATGACTTTGGGGAAACCAATAGAACTACAAGTAGCAATCATGAAGAAGATGATGAAGAAGAAGTAGTTGTGAAAGATGAAGATGATATGGTTGATTCCTCAGATATCTTTGCTCATATCAGTGGGGTGAACTCCTTCAAATGCAACTATTCCTTCCAGTCCTGGATTTGA 1260 0.4302 MLQDVFDQPLPPKAEPQQQHPIWLQDEISSPLSARIFELCNTDFFPETLPNSEVTSSSNCCYEENSSYATTNISVTVDVDNKLNSNSNTVTTPTSTTTTNTNNNTTNSSNLSIIFDSQEEIDNDISASIDFSLSPSFNVPPFLPATSQQEQFDFSSVQHQVQLAACSVVEGFSQYPNDSVAPPFMGAPLPSVFEEDCISSVPSYMALNPSSPCTYLSPGMPPYMPHGPLTTALSTGSSGIFGGNILLGSELQAQELEYQGENGRMYCTDSIQRVFNPPDLQALGTESQQLVPGAGSSASLPEISNLEDSSFKVGKLSVEQRKEKINRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGETNRTTSSNHEEDDEEEVVVKDEDDMVDSSDIFAHISGVNSFKCNYSFQSWI* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1716 419 MobiDBLite consensus disorder prediction 83 107 - -
Gso10g1716 419 PANTHER CCT MOTIF FAMILY PROTEIN 25 419 - -
Gso10g1716 419 MobiDBLite consensus disorder prediction 356 386 - -
Gso10g1716 419 MobiDBLite consensus disorder prediction 1 20 - -
Gso10g1716 419 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 25 419 - -
Gso10g1716 419 Pfam CCT motif 321 363 IPR010402 GO:0005515
Gso10g1716 419 MobiDBLite consensus disorder prediction 356 378 - -
Gso10g1716 419 ProSiteProfiles CCT domain profile. 321 363 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1716 Gso-Chr10 43880810 43885063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1716 292 370 C2C2-CO-like Transcription Factor Family AT5G24930 37.647 2.87e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso10g1716 CCT 3.6e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1716 - - gmx:100803778 771.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1628 20 46830804 46834808 Gso10g1716 10 43880810 43885063 GST