Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1715 ATGAAAATGATTTCATCTGCCTCCAACGAAAACAAGACGGTGGTGGACATGGACGACCACCTCGCCGGCCTGGGATACAAAGTCCGTTCATCGGAGCTGTGTCAAGTGGCTGCAAACATGGAGCGTTTAGAAAACGTGATTTCATCCACCGACCTATCTCAACTCGCATCAGACACAACCCTCTACGATCCTTCCAACATAGGGTTAGGTTCGTGGGTGGACACGCTCCTCTCCGAGTTCGACCAAACGGCGTCGTTACCGTTACAATACGATTTCGCCACGGATCCAAACCATAACAAGCAATTAGCGCTGGTCACCACCGTGGAAGAAGACTCGGGGATAAGACTGGTTCACATGCTGATGACGTGTGCTGATTCCGTGCAACGTGGTGACTTCTCATTCGCTGGCTCCCTCATTGAGAACATGCAGGGGTTGTTGGCGCACGTGAACACCAACTGCGGCATCGGAAAAGTCGCCGGCTACTTCATCGACGCCTTGCGCCGCCGCATCTCGAACACGCTTCCAACGTCATCATCCACTTACGAGAACGACGTTCTCTACCACAACTACTACGAAGCGTGTCCTTACTTGAAGTTCGCGCACTTCACCGCGAACCAGGCGATCTTGGAGGCCTTCAACGGCCACGATTGCGTCCACGTCATCGACTTCAACCTCATGCAAGGGCTCCAGTGGCCAGCGCTGATACAGGCACTGGCGCTCCGTCCCGGCGGACCGCCGCTGCTGAGGCTCACCGGTGTCGGGCCTCCCTCGGCGGAAAACCGCGACAATCTCCGCGAGATCGGGCTGAGACTCGCCGAGCTGGCGCGGTCCGTGAACGTGCGGTTCGCGTTCCGCGGCGTGGCGGCGTGGAGGCTGGAGGACGTGAAGCCGTGGATGTTACAGGTGAGTCTGAACGAGGCGGTGGCGGTGAACTCGATAATGCAGCTGCACCGGGTCACGGCGGTGGACGCCGCCGTGGAAGAAGTTCTCAGTTGGATCCGGAGTCTGAACCCTAAAATAGTGACGGTTGTGGAACAAGAAGCTAACCACAACGGGGAAGGGTTTTTGGAGCGGTTCACGGAGGCTTTGCATTACTATTCCACCGTCTTCGACTCGCTCGACGCGTGCCCGGTCGAACCGGACAAGGCTGCTTTGGCGGAGATGTATTTGCAGAGGGAGATATGCAACGTGGTGTGCTGTGAGGGACCGGCGCGGCTCGAGCGCCACGAGCCGCTCGCTAAGTGGAGGGATCGGCTCGGGAAAGCCGGCTTCAGACCCTTGCATTTGGGTTTCAACGCCTACAAGCAAGCCAGCATGTTGCTCACTCTGTTCTCAGCCGAGGGTTTCTGCGTCCAAGAGAATCAAGGCTCTTTGACACTGGGCTGGCATAGCCGCCCCTTAATCGCAGCTTCGGCTTGGCAAGCCGCGCCGCTGAGAGATGACGAAACGCTGCGTTTTGGGCATTGA 1467 0.5753 MKMISSASNENKTVVDMDDHLAGLGYKVRSSELCQVAANMERLENVISSTDLSQLASDTTLYDPSNIGLGSWVDTLLSEFDQTASLPLQYDFATDPNHNKQLALVTTVEEDSGIRLVHMLMTCADSVQRGDFSFAGSLIENMQGLLAHVNTNCGIGKVAGYFIDALRRRISNTLPTSSSTYENDVLYHNYYEACPYLKFAHFTANQAILEAFNGHDCVHVIDFNLMQGLQWPALIQALALRPGGPPLLRLTGVGPPSAENRDNLREIGLRLAELARSVNVRFAFRGVAAWRLEDVKPWMLQVSLNEAVAVNSIMQLHRVTAVDAAVEEVLSWIRSLNPKIVTVVEQEANHNGEGFLERFTEALHYYSTVFDSLDACPVEPDKAALAEMYLQREICNVVCCEGPARLERHEPLAKWRDRLGKAGFRPLHLGFNAYKQASMLLTLFSAEGFCVQENQGSLTLGWHSRPLIAASAWQAAPLRDDETLRFGH* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1715 488 ProSiteProfiles GRAS family profile. 107 474 IPR005202 -
Gso10g1715 488 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 11 478 IPR005202 -
Gso10g1715 488 Pfam GRAS domain family 116 474 IPR005202 -
Gso10g1715 488 PANTHER OS05G0574900 PROTEIN 11 478 - -
Gso10g1715 488 Pfam Transcriptional regulator DELLA protein N terminal 18 84 IPR021914 -
Gso10g1715 488 Gene3D - 16 80 IPR038088 -
Gso10g1715 488 SMART DELLA_2 18 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1715 Gso-Chr10 43878633 43880599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1715 9 474 GRAS Transcription Factor Family AT1G14920 46.615 3.55e-153 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso10g1715 GRAS 7.8e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1715 K14494 - gmx:100803245 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1629 20 46835061 46836773 Gso10g1715 10 43878633 43880599 GST