Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1702 ATGGCAACTCTGGCAAATCCTTGGTGGACAGGTCAGGGAGGGTTATCTGGGGTTGACCACCCAGGAACCCATTCACCTGGCCTAAGCAAACGCCACTCAGACCTTGGAATCAACGAAAACAGTGATAGCCACAACAATAGAGAAGAATTCGACGAAGACAATAGAGATGAACCAAAAGAGGGTGCAGTTGAGGTTGGAACCCGAAGACCAAGAGGAAGACCTCCTGGATCCAAAAACAAGCCAAAACCACCCATTTTCGTGACAAGGGACAGCCCAAATGCCCTGAGGAGCCACGTGATGGAGATAACTGGAGGAGCTGATGTTGCAGAGAGTGTTGCCCAATTCGCAAGGAGGCGTCAGCGTGGGGTTTGTGTGCTCAGTGGGAGTGGCTCAGTGGCCAATGTTACACTTAGACAGCCTTCTGCTCCTGGTGCTGTGGTGGCACTTCATGGAAGGTTTGAAATTTTGTCCCTAACCGGGACTTTCCTACCTGGTCCTGCTCCTCCAGGATCCACAGGACTCACCGTGTATCTGGCTGGAGGACAAGGCCAGGTAGTGGGAGGGAGTGTGGTTGGATCTCTAGTTGCAGCAGGACCAGTTATGGTCATTGCTGCAACTTTTGCTAATGCAACGTATGAGAGACTTCCACTTGATGAAGATGATGAGGGGCCTAGTTCGATGGTGGGGGCGCAAGGCGGAGGAGGATCGCCACCGCTGCCACTTGGAATTGGAAGCAGTGGGGGTGGCCAGTTGCAGGGTGGGATTCCAGATCCATCATCTCTGCCTTTGTATAATCTTCCACCAAATGGAGGAGGAGGTGGCCAGGTGGGGCATGAAGCTCTTGCTTGGGCTCATGGACGAGCACCTTTCTGA 873 0.5304 MATLANPWWTGQGGLSGVDHPGTHSPGLSKRHSDLGINENSDSHNNREEFDEDNRDEPKEGAVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEITGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPSAPGAVVALHGRFEILSLTGTFLPGPAPPGSTGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLDEDDEGPSSMVGAQGGGGSPPLPLGIGSSGGGQLQGGIPDPSSLPLYNLPPNGGGGGQVGHEALAWAHGRAPF* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1702 290 Gene3D - 95 222 - -
Gso10g1702 290 SUPERFAMILY AF0104/ALDC/Ptd012-like 92 220 - -
Gso10g1702 290 MobiDBLite consensus disorder prediction 216 272 - -
Gso10g1702 290 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 25 290 IPR014476 GO:0003680
Gso10g1702 290 Pfam Plants and Prokaryotes Conserved (PCC) domain 96 208 IPR005175 -
Gso10g1702 290 MobiDBLite consensus disorder prediction 35 67 - -
Gso10g1702 290 PANTHER DNA-BINDING PROTEIN-LIKE 25 290 - -
Gso10g1702 290 MobiDBLite consensus disorder prediction 1 92 - -
Gso10g1702 290 CDD DUF296 96 179 IPR005175 -
Gso10g1702 290 ProSiteProfiles PPC domain profile profile. 92 229 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1702 Gso-Chr10 43710103 43711348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1702 4 290 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 62.034 6.93e-100 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1702 - - gmx:100798994 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1641 20 46993427 46995631 Gso10g1702 10 43710103 43711348 GST