Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1691 ATGGATGAAGAAGGGTCAAGGGGGAGGGCCAAGGAGGACGCCGGAGATGTCCGGTACCGGGGGGTCCGGCGGCGGCCCTGGGGGAAGTTCGCGGCGGAGATTCGAGACTCGACGAGGCAGGGTCAGAGGGTGTGGCTGGGGACTTTCAACACGGCGGAGGAAGCGGCCAGAGCCTATGATAGAGCTGCTTATACCATGAGAGGTCCATTTGCAATCCTTAACTTTCCTGATGAGTACCCTGTGACTGCTGCTGGTGCCACTAATGCTGCCACTTATTCTTCTGCTTCATCATCATCATCCTTGGCCTCTTCTTCTCGGCATGCCGATGTGGAAGCTAGAGGAAGAAGTGAGCAAGGAAGAGAAGTGTTTGAGTTTGAGTACTTGGATGATAAGTTGTTGGAGGAGCTTCTTGATTGTGAGAACAAAAAGAAAAGAGGACCCTGA 444 0.536 MDEEGSRGRAKEDAGDVRYRGVRRRPWGKFAAEIRDSTRQGQRVWLGTFNTAEEAARAYDRAAYTMRGPFAILNFPDEYPVTAAGATNAATYSSASSSSSLASSSRHADVEARGRSEQGREVFEFEYLDDKLLEELLDCENKKKRGP* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1691 147 PANTHER DNA-BINDING DOMAIN 12 141 IPR044808 GO:0003700|GO:0009873
Gso10g1691 147 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Gso10g1691 147 CDD AP2 18 77 IPR001471 GO:0003700|GO:0006355
Gso10g1691 147 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Gso10g1691 147 Pfam AP2 domain 18 68 IPR001471 GO:0003700|GO:0006355
Gso10g1691 147 PANTHER ETHYLENE RESPONSE FACTOR 12 141 - -
Gso10g1691 147 MobiDBLite consensus disorder prediction 89 106 - -
Gso10g1691 147 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Gso10g1691 147 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Gso10g1691 147 MobiDBLite consensus disorder prediction 89 117 - -
Gso10g1691 147 SUPERFAMILY DNA-binding domain 18 78 IPR016177 GO:0003677
Gso10g1691 147 SMART rav1_2 18 81 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1691 Gso-Chr10 43586490 43587484 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1691 13 144 AP2-EREBP Transcription Factor Family AT3G23230 61.364 3.54e-43 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gso10g1691 AP2 1.8e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1691 - - gmx:100794227 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1651 20 47087913 47088884 Gso10g1691 10 43586490 43587484 GST