Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1690 ATGGAGGAGCACCAGAAGGGGAAGCTGCAGGGCAAGGAGGAGGTGCGGTTCCGCGGCGTGAGGCGGCGGCCGTGGGGGAAGTACGCGGCGGAGATAAGGGATCCATCGAAGCAAGGGTCGAGGCTGTGGTTGGGGACATTTGACACTGCTGAAGAAGCTGCTAGAGCTTATGATCGTGCAGCTTTTAACCTAAGAGGTCATCTTGCGATTCTGAATTTTCCTAGTGAGTACTATTCTCAGATAAGGGGTTCACCACCATATCCACCACATTTAGCAACACCCTCTTCCTCTTCTCATGCCAGTGAAAGCACTTCTTCTGCTGCACAACAAAGGCATGTTTTTGAGATTCCGTGTTTGGATGATAAGGTGTTGGAGGATCTTCTTGGTCTATCAGAGGAACACAAGAAGAAAAAGAAGGGAGATTGA 426 0.5023 MEEHQKGKLQGKEEVRFRGVRRRPWGKYAAEIRDPSKQGSRLWLGTFDTAEEAARAYDRAAFNLRGHLAILNFPSEYYSQIRGSPPYPPHLATPSSSSHASESTSSAAQQRHVFEIPCLDDKVLEDLLGLSEEHKKKKKGD* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1690 141 PANTHER ETHYLENE RESPONSE FACTOR 1 132 - -
Gso10g1690 141 SUPERFAMILY DNA-binding domain 17 75 IPR016177 GO:0003677
Gso10g1690 141 SMART rav1_2 16 80 IPR001471 GO:0003700|GO:0006355
Gso10g1690 141 ProSiteProfiles AP2/ERF domain profile. 16 74 IPR001471 GO:0003700|GO:0006355
Gso10g1690 141 MobiDBLite consensus disorder prediction 82 109 - -
Gso10g1690 141 PANTHER DNA-BINDING DOMAIN 1 132 IPR044808 GO:0003700|GO:0009873
Gso10g1690 141 Pfam AP2 domain 16 67 IPR001471 GO:0003700|GO:0006355
Gso10g1690 141 CDD AP2 16 74 IPR001471 GO:0003700|GO:0006355
Gso10g1690 141 Gene3D AP2/ERF domain 15 75 IPR036955 GO:0003700|GO:0006355
Gso10g1690 141 MobiDBLite consensus disorder prediction 93 109 - -
Gso10g1690 141 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Gso10g1690 141 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1690 Gso-Chr10 43578448 43579312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1690 14 136 AP2-EREBP Transcription Factor Family AT3G23230 68.548 1.20e-49 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gso10g1690 AP2 1.1e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1690 - - gmx:100793703 277.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1652 20 47098829 47099491 Gso10g1690 10 43578448 43579312 GST