Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1689 ATGGATTCACCTTCCTCCTTCTTCAACTCACCCTCTTCCGGTTTCTGCTCCGAATCTTCCTCTCCGGAAGCCTTCTCGTGGGAAGGGTACCTACCCTTCAACGAGAACGACCCGGAGGAGATGCTTCTATACGGCATGATCGCCGGCGCGACAACCGAGGAGCACTCCGGCGAGAGGGCGAGCTCGGAGGAGAGTGCTGCAGCACGGAAGGAGAAGTCGTACCGCGGCGTACGGCGGCGGCCGTGGGGGAAGTTCGCGGCGGAGATAAGGGACTCCACGCGCCACGGGATGAGGGTGTGGCTGGGGACATTCGACAGCGCCGAAGCCGCGGCTCTGGCTTACGACCAAGCCGCGTTCTCCATGCGCGGCTCGGCGGCGATTCTCAACTTCCCCGCGGAGATCGTTAGAGAGTCGCTTAAAGAGATGAACTACGCTCATGATGATTCCAACAACGAAGAAGGGTGCTCCCCTGTTGTCGCTCTCAAGAGGAAACACTCTTTGAGAAGGAAAATTAACGTCAGGAAGAAGAAGAACAACAATAACAATAGCAAACTACAAAGTAGTACCGTAGACAATGCTGTCGTGTTTGAAGACCTTGGTCCTGATTACTTGGAACAGCTGTTGATGTCCTCTGATCATCATATTCCCACCACCTTCTGA 660 0.553 MDSPSSFFNSPSSGFCSESSSPEAFSWEGYLPFNENDPEEMLLYGMIAGATTEEHSGERASSEESAAARKEKSYRGVRRRPWGKFAAEIRDSTRHGMRVWLGTFDSAEAAALAYDQAAFSMRGSAAILNFPAEIVRESLKEMNYAHDDSNNEEGCSPVVALKRKHSLRRKINVRKKKNNNNNSKLQSSTVDNAVVFEDLGPDYLEQLLMSSDHHIPTTF* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1689 219 ProSiteProfiles AP2/ERF domain profile. 73 131 IPR001471 GO:0003700|GO:0006355
Gso10g1689 219 MobiDBLite consensus disorder prediction 56 72 - -
Gso10g1689 219 PANTHER DNA-BINDING DOMAIN 26 210 IPR044808 GO:0003700|GO:0009873
Gso10g1689 219 SUPERFAMILY DNA-binding domain 73 133 IPR016177 GO:0003677
Gso10g1689 219 Gene3D AP2/ERF domain 72 133 IPR036955 GO:0003700|GO:0006355
Gso10g1689 219 Pfam AP2 domain 73 123 IPR001471 GO:0003700|GO:0006355
Gso10g1689 219 MobiDBLite consensus disorder prediction 53 73 - -
Gso10g1689 219 CDD AP2 72 132 IPR001471 GO:0003700|GO:0006355
Gso10g1689 219 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Gso10g1689 219 PRINTS Ethylene responsive element binding protein signature 97 113 IPR001471 GO:0003700|GO:0006355
Gso10g1689 219 SMART rav1_2 73 137 IPR001471 GO:0003700|GO:0006355
Gso10g1689 219 MobiDBLite consensus disorder prediction 1 23 - -
Gso10g1689 219 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 26 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1689 Gso-Chr10 43555858 43556986 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1689 31 213 AP2-EREBP Transcription Factor Family AT3G23240 62.903 1.16e-75 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gso10g1689 AP2 7.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1689 K14516 - gmx:100804481 372.474