Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1682 ATGAGCCAAGACCTCAAGCGAGACTACGTCGTTTCGGAGGAGATCGGCCGGGGAAGATTCGGCACCGTTTTCCGCTGCTCCTCCGCAGACTCCGGTCACTCCTACGCCGTCAAATCCATCGACAAGGTGGCAATAACCGCCGCCGGAGACTCCCTCGACGCGCAATGCCTATTGACGGAGCCCAAGATCGTTCAGCTTCTCTCCCCTCACCCTCACATCGTAAACCTCCACGATCTCTACGAAGACGAAACCAACCTTCACATGGTTCTCGACCTCTGTTACGAATCGCAGTTTCACCACCGCGTCATGTCCGAACCAGAAGCCGCTTCGGTGATGTGGCAACTCATGCAAGCCGTGGCGCACTGCCACCGCCTCGGCGTCGCGCACCGAGACGTGAAACCCGATAACATTCTCTTCGATGAGGAGAATCGGCTCAAATTAGCCGATTTCGGCTCGGCTGACACTTTTAAGGAGGGCGAGCCGATGAGCGGGGTGGTTGGGACGCCGCATTACGTGGCGCCGGAGGTCCTCGCCGGAAGGGATTACAACGAGAAGGTCGACGTGTGGAGCGCCGGCGTCGTTTTGTATCAAATGTTGGCAGGGTTTCTGCCGTTTCGAGGCGATTCTCCCGTGGAGATTTTCGAGGCCGTGCTTCGCGCCAATTTGAGGTTTCCGACTCGTGTTTTTTGCTCCGTCTCACCCGCGGCCAAGGATCTTCTTCGTAGGATGCTGTGTAAAGAGGTTTCTAGAAGGTTCTCCGCAGAACAAGTCCTAAGGCACCCATGGTTTAGCGTTGCTGAACAGAGTGAGTAA 813 0.5646 MSQDLKRDYVVSEEIGRGRFGTVFRCSSADSGHSYAVKSIDKVAITAAGDSLDAQCLLTEPKIVQLLSPHPHIVNLHDLYEDETNLHMVLDLCYESQFHHRVMSEPEAASVMWQLMQAVAHCHRLGVAHRDVKPDNILFDEENRLKLADFGSADTFKEGEPMSGVVGTPHYVAPEVLAGRDYNEKVDVWSAGVVLYQMLAGFLPFRGDSPVEIFEAVLRANLRFPTRVFCSVSPAAKDLLRRMLCKEVSRRFSAEQVLRHPWFSVAEQSE* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1682 270 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Gso10g1682 270 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
Gso10g1682 270 SUPERFAMILY Protein kinase-like (PK-like) 6 264 IPR011009 -
Gso10g1682 270 Pfam Protein kinase domain 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1682 270 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 266 - -
Gso10g1682 270 SMART serkin_6 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1682 270 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 1-LIKE 3 266 - -
Gso10g1682 270 ProSiteProfiles Protein kinase domain profile. 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso10g1682 270 CDD STKc_CAMK 8 262 - -
Gso10g1682 270 Gene3D Transferase(Phosphotransferase) domain 1 93 270 - -
Gso10g1682 270 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1682 Gso-Chr10 43480908 43482222 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1682 3 263 EF-hand Containing Proteins AT1G50700 40.520 8.48e-67 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gso10g1682 Pkinase 1.8e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1682 - K08794 gmx:547731 548.895