Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1655 ATGGGATTCTATCTTAATCTCAAACGCAAGGCGTTCCGGCTTAAACGGTTTCTGCTAGGACATGAAGGCAGAAAAAGAAAATACAAGCAGGCAAAAAAGCCTTCATGGATGAGGCCAATGACATATGGTTATCAAGTGGTGGAGAGTAATATGGCCAGAGATGGTTCTGATGACTCTGATTTTGATTCAGTTGTGGCACAGAGAGAGGAAATGGATCAAACAGAATTGTGGTATTTTGGAATCTTTGACGCACTAATTGGAGACAAAGTTACCAAGTACATGCAGTCTTATTTCTTTGACAAGATGCTTCAAGAGACTCATATAAGGAGAAAAAGCAAGGAAGCTCTGAAGAGAGCTTACCTTGGTGTAAGAGCAATGATCCGAGAGCAACACAAATTAGAGGAGACATGCAGAATGGGTTCAGCATCTGTTATGTTGATCGATGGAGAAAAACTTGTGGTAGCCAACATGGGAGATTACAGAATTGTTGTCTGCAGAGATGGCATAGCTCATCAGACAACTGGCACATACCTACAATCAGCGAAAATACATTGGTCTCGCAGATTCTTCGCAGGAAATGCAGCAGGGGCAAAGCATTCTAGAGGCTCTGATCTTTCCGTTAGAAGTGAAAGGATTGATTCTGATACTGAGTTTTTGATATTAGCAAGCAATGGCATATGGGAGGTGATGAAAAACCAAGAGGCTGTGAATCTGATAAGTCACATAGAGGATCCACAAGAAGCAGCTGAATGCTTGGCAAAGGAAGCTCTAATTAGGATGAGCAAAAGCAGCATCTCATGCTTAATCATTCGCTTTGACTGA 822 0.4185 MGFYLNLKRKAFRLKRFLLGHEGRKRKYKQAKKPSWMRPMTYGYQVVESNMARDGSDDSDFDSVVAQREEMDQTELWYFGIFDALIGDKVTKYMQSYFFDKMLQETHIRRKSKEALKRAYLGVRAMIREQHKLEETCRMGSASVMLIDGEKLVVANMGDYRIVVCRDGIAHQTTGTYLQSAKIHWSRRFFAGNAAGAKHSRGSDLSVRSERIDSDTEFLILASNGIWEVMKNQEAVNLISHIEDPQEAAECLAKEALIRMSKSSISCLIIRFD* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1655 273 CDD PP2Cc 78 272 IPR001932 -
Gso10g1655 273 ProSiteProfiles PPM-type phosphatase domain profile. 58 272 IPR001932 -
Gso10g1655 273 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 5 272 - -
Gso10g1655 273 Gene3D - 190 273 IPR036457 -
Gso10g1655 273 Gene3D - 26 182 IPR036457 -
Gso10g1655 273 SMART PP2C_4 48 270 IPR001932 -
Gso10g1655 273 Pfam Protein phosphatase 2C 209 263 IPR001932 -
Gso10g1655 273 Pfam Protein phosphatase 2C 46 173 IPR001932 -
Gso10g1655 273 SUPERFAMILY PP2C-like 64 273 IPR036457 -
Gso10g1655 273 PANTHER ALPHABET, ISOFORM E-RELATED 5 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1655 Gso-Chr10 43152500 43155133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1655 1 272 PP2C-type Phosphatase Gene Family AT3G23360 47.122 1.80e-79 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1655 K19704 - gmx:100785227 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1684 20 47481811 47484401 Gso10g1655 10 43152500 43155133 GST